RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 SELENONQ9NZV5 590 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 EIF3LQ9Y262 564 aaKnown RBP17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 DGKBQ9Y6T7 804 aa17.98■□□□□ 0.47
PCDHA1-202ENST00000394633 CBX4O00257 560 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC1A7O00341 560 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 FFAR3O14843 346 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 GPR42O15529 346 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 HS6ST1O60243 411 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 XYLBO75191 536 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 PRKACGP22612 351 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 OPRL1P41146 370 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 ITGADQ13349 1161 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 PON2Q15165 354 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 RGS21Q2M5E4 152 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 GTDC1Q4AE62 458 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 RUNDC3AQ59EK9 446 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 FAM171A1Q5VUB5 890 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 TTC16Q8NEE8 873 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 OR52E4Q8NGH9 312 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 FRS2Q8WU20 508 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 FAM193BQ96PV7 902 aaPredicted RBP17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 EXD2Q9NVH0 621 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 ENPP5Q9UJA9 477 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 BAG5Q9UL15 447 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 BLOC1S6Q9UL45 172 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 NAALAD2Q9Y3Q0 740 aa17.97■□□□□ 0.47
PCDHA1-202ENST00000394633 LOC100130705A0A1B0GUX0 176 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 TBKBP1A7MCY6 615 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 RAD51BO15315 384 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 TSPAN3O60637 253 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 SCELO95171 688 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 GUCA1CO95843 209 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 RHOCP08134 193 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 MSH3P20585 1137 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 PCMT1P22061 227 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 DCTP40126 519 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 GP2P55259 537 aaKnown RBP17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 HMGCS1Q01581 520 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 TOP3AQ13472 1001 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 ZNF691Q5VV52 312 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 NIPAL1Q6NVV3 410 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 RSPO2Q6UXX9 243 aaPredicted RBP17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 RNF19BQ6ZMZ0 732 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 NPAS4Q8IUM7 802 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 MICU2Q8IYU8 434 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 PHACTR4Q8IZ21 702 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 LIX1Q8N485 282 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 KRTCAP2Q8N6L1 136 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 OR5K1Q8NHB7 308 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 SPATA17Q96L03 361 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 DPY30Q9C005 99 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 ARMC7Q9H6L4 198 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 MARCH5Q9NX47 278 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 LTBP2Q14767 1821 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 RGS14O43566 566 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 SERPINB7O75635 380 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 INMTO95050 263 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 PRAMEF12O95522 483 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 IDUAP35475 653 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 GSTM4Q03013 218 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 MTA1Q13330 715 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 EGFLAMQ63HQ2 1017 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 PIWIL3Q7Z3Z3 882 aaKnown RBP17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 STK40Q8N2I9 435 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 EID2BQ96D98 161 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 ZFP14Q9HCL3 533 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 SLC6A13Q9NSD5 602 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 SNX5Q9Y5X3 404 aa17.96■□□□□ 0.47
PCDHA1-202ENST00000394633 OR6C75A6NL08 312 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 PRMT5O14744 637 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GLUD1P00367 558 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 PGRP06401 933 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ITGB6P18564 788 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ITIH1P19827 911 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GGT5P36269 586 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 NRIP1P48552 1158 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 SLC11A1P49279 550 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CACNG1Q06432 222 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 SUSD1Q6UWL2 747 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GPR149Q86SP6 731 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GALNT13Q8IUC8 556 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 DENND1CQ8IV53 801 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 EID3Q8N140 333 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 LKAAEAR1Q8TD35 194 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 NODALQ96S42 347 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 NEURL2Q9BR09 285 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GPR62Q9BZJ7 368 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 DCAF13Q9NV06 445 aaKnown RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 IL17CQ9P0M4 197 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 TMEFF2Q9UIK5 374 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 INVSQ9Y283 1065 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 TRBV5-3A0A0A0MS03 114 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ILVBLA1L0T0 632 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CREG1O75629 220 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 PARNO95453 639 aaKnown RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CD160O95971 181 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 EN2P19622 333 aaPredicted RBP17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 GDF5P43026 501 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 ARF5P84085 180 aa17.95■□□□□ 0.46
PCDHA1-202ENST00000394633 CTF1Q16619 201 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms