RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 FAM102BQ5T8I3 360 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 HEATR6Q6AI08 1181 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 PLET1Q6UQ28 207 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 CUZD1Q86UP6 607 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 RASGRP3Q8IV61 690 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 GPALPP1Q8IXQ4 340 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 MINDY1Q8N5J2 469 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 NIPA2Q8N8Q9 360 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 KBTBD8Q8NFY9 601 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 TEX47Q8TBZ9 253 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 BARD1Q99728 777 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 SHARPINQ9H0F6 387 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 TNPO3Q9Y5L0 923 aaKnown RBP12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 KCNMB2Q9Y691 235 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 V9GYH0 126 aa12.3□□□□□ -0.44
SLC28A1-203ENST00000394573 FZD9O00144 591 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 ASS1P00966 412 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 RPLP0P05388 317 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SDC4P31431 198 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 HIBADHP31937 336 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SOX6P35712 828 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 RPL6Q02878 288 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SCN1BQ07699 218 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 FAM83EQ2M2I3 478 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SLC39A4Q6P5W5 647 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 CYHR1Q6ZMK1 362 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 ZC3HC1Q86WB0 502 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 STYXQ8WUJ0 223 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 FAM149B1Q96BN6 582 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SGK3Q96BR1 496 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 COPZ2Q9P299 210 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 NLKQ9UBE8 527 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 CYTH4Q9UIA0 394 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 C3orf18Q9UK00 162 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 OAS3Q9Y6K5 1087 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 TCRBV16S1A1N1A0A5B0 115 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 NT5C1B-RDH14C9J2C7 533 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 APOL1O14791 398 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 FZD6O60353 706 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 RAF1P04049 648 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 POLBP06746 335 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 ICAM3P32942 547 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 ARFIP1P53367 373 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 HERVK_113P63132 956 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 POU4F1Q01851 419 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 VEPH1Q14D04 833 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 LARS2Q15031 903 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 RPS6KA2Q15349 733 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 ETFDHQ16134 617 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SEZ6Q53EL9 994 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 KLHL12Q53G59 568 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 MPP7Q5T2T1 576 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 FAM131AQ6UXB0 335 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 TFAP2EQ6VUC0 442 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 TMPRSS11AQ6ZMR5 421 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 CENPLQ8N0S6 344 aaPredicted RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 DTWD1Q8N5C7 304 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 OR4D10Q8NGI6 311 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 PCDH19Q8TAB3 1148 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 CCDC126Q96EE4 140 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 TSEN34Q9BSV6 310 aaKnown RBP12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 C1QTNF1Q9BXJ1 281 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 UGT2B28Q9BY64 529 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 AKTIPQ9H8T0 292 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 MEAF6Q9HAF1 191 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SMURF1Q9HCE7 757 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 MIOSQ9NXC5 875 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 MAPRE3Q9UPY8 281 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 ERVK-19Q9WJR5 959 aa12.29□□□□□ -0.44
SLC28A1-203ENST00000394573 SMIM30A4D0T7 59 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 SGCEO43556 437 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 HPGDSO60760 199 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 STAU1O95793 577 aaKnown RBP12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 ARP10275 920 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 CD19P15391 556 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 NPR1P16066 1061 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 ERCC2P18074 760 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 PTGER2P43116 358 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 MTPNP58546 118 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 RUNX1T1Q06455 604 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 PUDPQ08623 228 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 GPR139Q6DWJ6 353 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 RASSF6Q6ZTQ3 369 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 SLC16A13Q7RTY0 426 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 NUDT8Q8WV74 236 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 LPAR1Q92633 364 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 PDLIM5Q96HC4 596 aaKnown RBP12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 MRGPRX2Q96LB1 330 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 HYLS1Q96M11 299 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 SAMD11Q96NU1 681 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 HEXA-AS1Q9H8Q6 139 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 CDH9Q9ULB4 789 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 PLCL2Q9UPR0 1127 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 UBXN8O00124 270 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 SOCS7O14512 581 aa12.28□□□□□ -0.44
SLC28A1-203ENST00000394573 PCDH17O14917 1159 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms