RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 FBXO15Q8NCQ5 510 aaPredicted RBP14.59□□□□□ -0.07
CCT4-201ENST00000394440 FOXJ1Q92949 421 aa14.59□□□□□ -0.07
CCT4-201ENST00000394440 SLC29A3Q9BZD2 475 aa14.59□□□□□ -0.07
CCT4-201ENST00000394440 NDE1Q9NXR1 346 aa14.59□□□□□ -0.07
CCT4-201ENST00000394440 ZFR2Q9UPR6 939 aaKnown RBP14.59□□□□□ -0.07
CCT4-201ENST00000394440 PCYT1BQ9Y5K3 369 aaPredicted RBP14.59□□□□□ -0.07
CCT4-201ENST00000394440 LSM1O15116 133 aaKnown RBP14.58□□□□□ -0.07
CCT4-201ENST00000394440 PCDH8O95206 1070 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 CATP04040 527 aaKnown RBP14.58□□□□□ -0.07
CCT4-201ENST00000394440 COL9A1P20849 921 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 TEAD1P28347 426 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 PFN3P60673 137 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 CDK3Q00526 305 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 GTF2H3Q13889 308 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 LRP8Q14114 963 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 FGL2Q14314 439 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 KIF19Q2TAC6 998 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 REP15Q6BDI9 236 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 RIPOR1Q6ZS17 1223 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 MAFAQ8NHW3 353 aaPredicted RBP14.58□□□□□ -0.07
CCT4-201ENST00000394440 USP7Q93009 1102 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 SLC52A3Q9NQ40 469 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 HEBP1Q9NRV9 189 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 NKX1-2Q9UD57 310 aaPredicted RBP14.58□□□□□ -0.07
CCT4-201ENST00000394440 PIAS3Q9Y6X2 628 aa14.58□□□□□ -0.07
CCT4-201ENST00000394440 KCNE1BA0A087WTH5 132 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 PABPN1LA6NDY0 278 aaKnown RBP14.58□□□□□ -0.08
CCT4-201ENST00000394440 H3BM21 787 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 PLRG1O43660 514 aaKnown RBP14.58□□□□□ -0.08
CCT4-201ENST00000394440 RNASEH2AO75792 299 aaKnown RBP14.58□□□□□ -0.08
CCT4-201ENST00000394440 CIB2O75838 187 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 DPP6P42658 865 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 ZFP36L2P47974 494 aaKnown RBP14.58□□□□□ -0.08
CCT4-201ENST00000394440 STARD3Q14849 445 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 ZRSR2Q15696 482 aaKnown RBP14.58□□□□□ -0.08
CCT4-201ENST00000394440 CCSMST1Q4G0I0 132 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 FBXW8Q8N3Y1 598 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 OR2L2Q8NH16 312 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 HM13Q8TCT9 377 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 DNASE1L2Q92874 299 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 PYCR2Q96C36 320 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 HBEGFQ99075 208 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 WDR41Q9HAD4 459 aa14.58□□□□□ -0.08
CCT4-201ENST00000394440 PRAMEF4O60810 478 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 PDE5AO76074 875 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 SORBS2O94875 1100 aaKnown RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 CLDN9O95484 217 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 PCCBP05166 539 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 HOXB2P14652 356 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 BDKRB1P46663 353 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 ATP6AP1LQ52LC2 224 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 PRAMEF9Q5VWM5 478 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 TRIM46Q7Z4K8 759 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 L3MBTL4Q8NA19 623 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 TP53I13Q8NBR0 393 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 CCDC138Q96M89 665 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 TEX101Q9BY14 249 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 MRPL1Q9BYD6 325 aaKnown RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 C8orf33Q9H7E9 229 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 DCLRE1BQ9H816 532 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 KCNK12Q9HB15 430 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 DNAJC11Q9NVH1 559 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 STOX2Q9P2F5 926 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 SLC22A14Q9Y267 594 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 L3MBTL1Q9Y468 752 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 MGAT4DA6NG13 374 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 DLL1O00548 723 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 NRP2O60462 931 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 POP7O75817 140 aaKnown RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 KLF8O95600 359 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 DRD1P21728 446 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 MAP4P27816 1152 aaKnown RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 TRIM23P36406 574 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 CCR3P51677 355 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 PLOD1Q02809 727 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 TMEM259Q4ZIN3 620 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 PDCD4Q53EL6 469 aaKnown RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 SDE2Q6IQ49 451 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 C8orf82Q6P1X6 216 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 HACD2Q6Y1H2 254 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 BNC2Q6ZN30 1099 aaPredicted RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 HPS6Q86YV9 775 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.57□□□□□ -0.08
CCT4-201ENST00000394440 CFAP206Q8IYR0 622 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 SLC44A3Q8N4M1 653 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 CFAP61Q8NHU2 1237 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 LGR4Q9BXB1 951 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 C1QTNF2Q9BXJ5 285 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 ATG10Q9H0Y0 220 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 DPEP2Q9H4A9 486 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 MBNL1Q9NR56 388 aaKnown RBP14.57□□□□□ -0.08
CCT4-201ENST00000394440 FBXL12Q9NXK8 326 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 KLQ9UEF7 1012 aa14.57□□□□□ -0.08
CCT4-201ENST00000394440 BBIP1A8MTZ0 92 aa14.56□□□□□ -0.08
CCT4-201ENST00000394440 MANBAO00462 879 aa14.56□□□□□ -0.08
CCT4-201ENST00000394440 FFAR3O14843 346 aa14.56□□□□□ -0.08
CCT4-201ENST00000394440 GPR42O15529 346 aa14.56□□□□□ -0.08
CCT4-201ENST00000394440 C1orf105O95561 183 aa14.56□□□□□ -0.08
CCT4-201ENST00000394440 LMNAP02545 664 aaKnown RBP14.56□□□□□ -0.08
CCT4-201ENST00000394440 CAPN3P20807 821 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms