RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 FXYD1O00168 92 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 WNT9AO14904 365 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 B3GALT4O96024 378 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PCNAP12004 261 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 CYP2A7P20853 494 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 CD9P21926 228 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 NFKBIAP25963 317 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 GPR1P46091 355 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 IRF8Q02556 426 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 ADGRE1Q14246 886 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SHHQ15465 462 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SPANXN4Q5MJ08 99 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 TANGO2Q6ICL3 276 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 NANOGP8Q6NSW7 305 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 ZFP1Q6P2D0 407 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 NPAS3Q8IXF0 933 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SPDYE1Q8NFV5 336 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 GANCQ8TET4 914 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 KLK6Q92876 244 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 HOPXQ9BPY8 73 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 C1QTNF3Q9BXJ4 246 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 NANOGQ9H9S0 305 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 C6orf203Q9P0P8 240 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 TMEM98Q9Y2Y6 226 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 ASPDHA6ND91 283 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PDLIM1O00151 329 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 MANBAO00462 879 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 RECQL5O94762 991 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 KRT6AP02538 564 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 KRT6BP04259 564 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 FSHRP23945 695 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PSMD8P48556 350 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 KRT6CP48668 564 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 ATP4BP51164 291 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 RHDQ02161 417 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 DMC1Q14565 340 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 XKR6Q5GH73 641 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 NEK5Q6P3R8 708 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SYTL1Q8IYJ3 562 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 KIAA2013Q8IYS2 634 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 EGLN2Q96KS0 407 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 EFHD1Q9BUP0 239 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 COQ10BQ9H8M1 238 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SUCOQ9UBS9 1254 aaKnown RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PCDHGB4Q9UN71 923 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PCDHGB5Q9Y5G0 923 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 RNF103-CHMP3A0A140T963 221 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 BBIP1A8MTZ0 92 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PCDH8O95206 1070 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 LYNP07948 512 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 GSK3BP49841 420 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 MRPS35P82673 323 aaKnown RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 COL9A2Q14055 689 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 RCAN2Q14206 197 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 THEMIS2Q5TEJ8 643 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 CACHD1Q5VU97 1274 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SP7Q8TDD2 431 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 ASB11Q8WXH4 323 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SUSD6Q92537 303 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 GLYATL1Q969I3 302 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 AURKBQ96GD4 344 aaPredicted RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 PPP3R2Q96LZ3 170 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 ACAT2Q9BWD1 397 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 BATF3Q9NR55 127 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 CD300AQ9UGN4 299 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 TMCO1Q9UM00 188 aa10.87□□□□□ -0.67
TCOF1-203ENST00000394269 CFAP20Q9Y6A4 193 aaKnown RBP10.87□□□□□ -0.67
TCOF1-203ENST00000394269 SPEGQ15772 3267 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 UQCRBP14927 111 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 ZNF30P17039 623 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 EMX2Q04743 252 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 SELPLGQ14242 412 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 MAPKAPK3Q16644 382 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 OGFOD2Q6N063 350 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 YAF2Q8IY57 180 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 CHPFQ8IZ52 775 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 PHOSPHO2Q8TCD6 241 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 BTN2A2Q8WVV5 523 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 FIG4Q92562 907 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 KXD1Q9BQD3 176 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 ZDHHC7Q9NXF8 308 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 DPP7Q9UHL4 492 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 MAGEA13PA6NCF6 341 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 MATN4O95460 622 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 CISD3P0C7P0 127 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 ATP6V1B1P15313 513 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 OXTRP30559 389 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 SEC13P55735 322 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 ZNF234Q14588 700 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 PDK3Q15120 406 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 GTDC1Q4AE62 458 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 ZBTB49Q6ZSB9 765 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 ZNF557Q8N988 423 aaPredicted RBP10.86□□□□□ -0.67
TCOF1-203ENST00000394269 LEMD2Q8NC56 503 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 GPR156Q8NFN8 814 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 OR10Q1Q8NGQ4 319 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 OR2T34Q8NGX1 318 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 OR2T3Q8NH03 318 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 SMARCD2Q92925 531 aa10.86□□□□□ -0.67
TCOF1-203ENST00000394269 OTUB2Q96DC9 234 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms