RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 ST6GAL1P15907 406 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PAMP19021 973 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 SHMT2P34897 504 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 STAT5AP42229 794 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 TUBB4BP68371 445 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PRKAA1Q13131 559 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 TUBB3Q13509 450 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 TUBB2AQ13885 445 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 DHX34Q14147 1143 aaKnown RBP11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PPP1R7Q15435 360 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 MSS51Q4VC12 460 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 SYTL3Q4VX76 610 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 ZNF789Q5FWF6 425 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PLEKHS1Q5SXH7 462 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PTRHD1Q6GMV3 140 aaKnown RBP11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PWWP2BQ6NUJ5 590 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 CASC4Q6P4E1 433 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 CYB5D1Q6P9G0 228 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 SYDE1Q6ZW31 735 aaPredicted RBP11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PCGF5Q86SE9 256 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 HOOK3Q86VS8 718 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 RASGRP3Q8IV61 690 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 ESX1Q8N693 406 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 IL22RA1Q8N6P7 574 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR8K5Q8NH50 307 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 ZNF669Q96BR6 464 aaPredicted RBP11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PANX3Q96QZ0 392 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 OR2A14Q96R47 310 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 TUBB2BQ9BVA1 445 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PLAC1Q9HBJ0 212 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PDE7BQ9NP56 450 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 FGF21Q9NSA1 209 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 INTS10Q9NVR2 710 aaKnown RBP11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 SPHK1Q9NYA1 384 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 ACTR10Q9NZ32 417 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 SAMD15Q9P1V8 674 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 RNF14Q9UBS8 474 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 RARRES3Q9UL19 164 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 MED16Q9Y2X0 877 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 RPS6KL1Q9Y6S9 549 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 FAM169AQ9Y6X4 670 aa11.03□□□□□ -0.64
IGHV4-28-201ENST00000390612 PRRC2CQ9Y520 2896 aaKnown RBP11.02□□□□□ -0.64
IGHV4-28-201ENST00000390612 PIPSLA2A3N6 862 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 H3BMH7 237 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 H3BMM5 538 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CCDC188H7C350 402 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 PRICKLE3O43900 615 aaPredicted RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 KIAA0754O94854 1291 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 MATN4O95460 622 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ITGB2P05107 769 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CHRM5P08912 532 aaPredicted RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 PKMP14618 531 aaKnown RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CDH3P22223 829 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 F8A1P23610 371 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ATP5DP30049 168 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 PEBP1P30086 187 aaKnown RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 PKLRP30613 574 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 FMO4P31512 558 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 GABRA4P48169 554 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CSE1LP55060 971 aaKnown RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 EIF3BP55884 814 aaKnown RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ABRQ12979 859 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 LINC00303Q3SY05 128 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CRTC2Q53ET0 693 aaPredicted RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF549Q6P9A3 640 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 SPESP1Q6UW49 350 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 C6orf15Q6UXA7 325 aaPredicted RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZNF517Q6ZMY9 492 aaPredicted RBP11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 IGDCC3Q8IVU1 814 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 LMNTD2Q8IXW0 634 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 LINC01555Q8NAE3 123 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 GALNT6Q8NCL4 622 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 SLC39A7Q92504 469 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CAPZA3Q96KX2 299 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 RUNDC3BQ96NL0 473 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ULBP3Q9BZM4 244 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 SYTL2Q9HCH5 934 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 IL1RAPL1Q9NZN1 696 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 KLHL42Q9P2K6 505 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 GALPQ9UBC7 116 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 ASIC3Q9UHC3 531 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 IL17BQ9UHF5 180 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 CRYL1Q9Y2S2 319 aa11.02□□□□□ -0.65
IGHV4-28-201ENST00000390612 NBASA2RRP1 2371 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 GSAPA4D1B5 854 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 PFDN6O15212 129 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 NIPSNAP2O75323 286 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 C1QL1O75973 258 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 C1orf105O95561 183 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 PVRP15151 417 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 UGT2B7P16662 529 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 RAB28P51157 221 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 CLCN7P51798 805 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 CTBP1Q13363 440 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 KIR2DS3Q14952 304 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 MORF4L2Q15014 288 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 TMED2Q15363 201 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 GPR19Q15760 415 aa11.01□□□□□ -0.65
IGHV4-28-201ENST00000390612 ZIC1Q15915 447 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms