RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 GTDC1Q4AE62 458 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 BCL7AQ4VC05 210 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 FAM98BQ52LJ0 330 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 RUNDC3AQ59EK9 446 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CELF3Q5SZQ8 465 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 FAM171A1Q5VUB5 890 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 C9orf57Q5W0N0 161 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 FAM160B1Q5W0V3 765 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ZCCHC8Q6NZY4 707 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SPESP1Q6UW49 350 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TMC5Q6UXY8 1006 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CLEC20AQ6ZU45 233 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CCDC149Q6ZUS6 474 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TUBA1AQ71U36 451 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 DPH6Q7L8W6 267 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 NRARPQ7Z6K4 114 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CTU1Q7Z7A3 348 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ADCK1Q86TW2 530 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 NLRP8Q86W28 1048 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 IFNEQ86WN2 208 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ZDHHC13Q8IUH4 622 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 GRAMD2AQ8IUY3 354 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CCDC103Q8IW40 242 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 GALNT12Q8IXK2 581 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 MICU2Q8IYU8 434 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ENTHD1Q8IYW4 607 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TCTE3Q8IZS6 198 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CACTIN-AS1Q8N1I8 211 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CYP4Z2PQ8N1L4 340 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 PGBD3Q8N328 593 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 DNAJC22Q8N4W6 341 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 NATD1Q8N6N6 113 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 DNAAF3Q8N9W5 541 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 GALNT6Q8NCL4 622 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CCNYQ8ND76 341 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 PPHLN1Q8NEY8 458 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 IPMKQ8NFU5 416 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 FBXO30Q8TB52 745 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ITFG1Q8TB96 612 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SLC2A14Q8TDB8 520 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 JPH3Q8WXH2 748 aaPredicted RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 FCGR1BQ92637 280 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 GTF2H4Q92759 462 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 GLMNQ92990 594 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 UBE2FQ969M7 185 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 RNF166Q96A37 237 aaPredicted RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 KIAA1191Q96A73 305 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TUBGCP3Q96CW5 907 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SLC47A1Q96FL8 570 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TSPAN17Q96FV3 270 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TRMT61AQ96FX7 289 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TOE1Q96GM8 510 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 MAP6Q96JE9 813 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 PPM1MQ96MI6 270 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF599Q96NL3 588 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 WDFY2Q96P53 400 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 MCCC1Q96RQ3 725 aaPredicted RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ZNF382Q96SR6 550 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SH3GL1Q99961 368 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TMEM246Q9BRR3 403 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 AARSD1Q9BTE6 412 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CENPOQ9BU64 300 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 C1QTNF7Q9BXJ2 289 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TEX13BQ9BXU2 312 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ITPAQ9BY32 194 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 DUSP16Q9BY84 665 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 BARHL1Q9BZE3 327 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 PRKD2Q9BZL6 878 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ULBP1Q9BZM6 244 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ROGDIQ9GZN7 287 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 MKRN2Q9H000 416 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 MIXL1Q9H2W2 232 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TFB2MQ9H5Q4 396 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 RNF167Q9H6Y7 350 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 NIPAL2Q9H841 368 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SP110Q9HB58 689 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SPC25Q9HBM1 224 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 POPDC3Q9HBV1 291 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SYTL2Q9HCH5 934 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CCNB1IP1Q9NPC3 277 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 IL1RAPQ9NPH3 570 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 CRTAC1Q9NQ79 661 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ITM2CQ9NQX7 267 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 NRBP2Q9NSY0 501 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 COMMD8Q9NX08 183 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ASIC5Q9NY37 505 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 PSORS1C1Q9UIG5 152 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 C3orf18Q9UK00 162 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 RIMKLBQ9ULI2 386 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ABCG2Q9UNQ0 655 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 KCNH4Q9UQ05 1017 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 RNF6Q9Y252 685 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 MAN2B2Q9Y2E5 1009 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 TMA7Q9Y2S6 64 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 LSM2Q9Y333 95 aaKnown RBP3.38□□□□□ -1.87
TRAV39-201ENST00000390466 ANGPTL3Q9Y5C1 460 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 PCDHGB2Q9Y5G2 931 aa3.38□□□□□ -1.87
TRAV39-201ENST00000390466 SNX5Q9Y5X3 404 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms