RNA–Protein interactions for RNA: ENST00000389980.7

SPTBN1-203, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,164 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-203ENST00000389980 PHPT1Q9NRX4 125 aaPredicted RBP11.9□□□□□ -0.5
SPTBN1-203ENST00000389980 ANGPTL3Q9Y5C1 460 aa11.9□□□□□ -0.5
SPTBN1-203ENST00000389980 PABPN1LA6NDY0 278 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 FAM170BA6NMN3 283 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC16A5O15375 505 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 STK16O75716 305 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 ENO2P09104 434 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 LINC00032P0C843 101 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 C7P10643 843 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 MYCLP1P12525 358 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 CPA2P48052 419 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PRKCQQ04759 706 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PTCHD3Q3KNS1 767 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PUS10Q3MIT2 529 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 SYT13Q7L8C5 426 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 AMZ2Q86W34 360 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 APLFQ8IW19 511 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 DDIASQ8IXT1 998 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 OR4F6Q8NGB9 312 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 HM13Q8TCT9 377 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 UBTD2Q8WUN7 234 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 RLN3Q8WXF3 142 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 UTP4Q969X6 686 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC7A6OSQ96CW6 309 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 C19orf60Q96EN9 201 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 MAELQ96JY0 434 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 ZNF382Q96SR6 550 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 APOOQ9BUR5 198 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PLEKHM1Q9Y4G2 1056 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 C17orf113A0A1B0GUU1 675 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 K7EPI3 171 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 GIPC1O14908 333 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 ATP6V1G2O95670 118 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 CEACAM5P06731 702 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 ITPKAP23677 461 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PAX7P23759 505 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 RPL10P27635 214 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 MAP4P27816 1152 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PXNP49023 591 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 DGKEP52429 567 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 TRAF3Q13114 568 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 TCEA2Q15560 299 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 NEK5Q6P3R8 708 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 FAM160A2Q8N612 972 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 POU5F2Q8N7G0 328 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 OR2T34Q8NGX1 318 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 MAFAQ8NHW3 353 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 PTCD3Q96EY7 689 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 NSL1Q96IY1 281 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 HBEGFQ99075 208 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 C1QTNF7Q9BXJ2 289 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 TPSD1Q9BZJ3 242 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 C6orf106Q9H6K1 298 aaPredicted RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 USP36Q9P275 1121 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 CFAP20Q9Y6A4 193 aaKnown RBP11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 SDK1Q7Z5N4 2213 aa11.89□□□□□ -0.51
SPTBN1-203ENST00000389980 KANSL1LA0AUZ9 987 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 LRRC72A6NJI9 287 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 WDR47O94967 919 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 SEMA4FO95754 770 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 ACP5P13686 325 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 EPORP19235 508 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 TEAD1P28347 426 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 PIK3CGP48736 1102 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 CCNG1P51959 295 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 INHBCP55103 352 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 CDKL1Q00532 357 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 SFSWAPQ12872 951 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 HABP4Q5JVS0 413 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 TPRG1LQ5T0D9 272 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 PPFIBP2Q8ND30 876 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 PHC3Q8NDX5 983 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 FOPNLQ96NB1 174 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 PKP4Q99569 1192 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 NRTNQ99748 197 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 OR52A5Q9H2C5 316 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 CAAP1Q9H8G2 361 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC22A14Q9Y267 594 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 STK25O00506 426 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 FFAR3O14843 346 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 KMOO15229 486 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 GPR42O15529 346 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 C1orf105O95561 183 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 SLC16A8O95907 504 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 CATP04040 527 aaKnown RBP11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 CAPN1P07384 714 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 EPB42P16452 691 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 GGT5P36269 586 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 HTR6P50406 440 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 AP1S2P56377 157 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 NAA20P61599 178 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 LRRC32Q14392 662 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 KRT72Q14CN4 511 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 MILR1Q7Z6M3 343 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 LONP2Q86WA8 852 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 TRIM69Q86WT6 500 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 MYLK4Q86YV6 388 aaPredicted RBP11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 SNX31Q8N9S9 440 aa11.88□□□□□ -0.51
SPTBN1-203ENST00000389980 TSTD1Q8NFU3 115 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms