RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CDKAL1Q5VV42 579 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TNFAIP8L2Q6P589 184 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 TOMM5Q8N4H5 51 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TEX19Q8NA77 164 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 CASTOR1Q8WTX7 329 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 NINJ1Q92982 152 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 FCRL2Q96LA5 508 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 TBL1XR1Q9BZK7 514 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 KAT8Q9H7Z6 458 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 CXorf21Q9HAI6 301 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MANSC4A6NHS7 340 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 MSI1O43347 362 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 BPGMP07738 259 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 CDKN1CP49918 316 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 TUBA4AP68366 448 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RPA4Q13156 261 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 IFI44LQ53G44 452 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SHQ1Q6PI26 577 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF550Q7Z398 422 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 KCNK18Q7Z418 384 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RASGRP3Q8IV61 690 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC37A3Q8NCC5 494 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 OR8S1Q8NH09 359 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 AKT1S1Q96B36 256 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 NECAB3Q96P71 396 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 IL12RB2Q99665 862 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MIPEPQ99797 713 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TREX2Q9BQ50 279 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF670Q9BS34 389 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TRMT61BQ9BVS5 477 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 SRMSQ9H3Y6 488 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TLE6Q9H808 572 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 FZD3Q9NPG1 666 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RAI2Q9Y5P3 530 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PRR36Q9H6K5 1346 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ADAMTS12P58397 1594 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 NUMA1Q14980 2115 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 J3QLW9 94 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MUSKO15146 869 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC31A1O15431 190 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF19P17023 458 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 CSTF2P33240 577 aaKnown RBP eCLIP5.77□□□□□ -1.494e-9■■■■□ 25.7
RFX3-204ENST00000382004 MAGEA3P43357 314 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 XKP51811 444 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 FXYD6P3P58550 94 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TGFB2P61812 414 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 TEAD4Q15561 434 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 C6orf183Q5T699 404 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 VWA5B1Q5TIE3 1220 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 CHST9Q7L1S5 443 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF598Q86UK7 904 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 UNC93AQ86WB7 457 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 LAS2Q8IYD9 372 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 NXPE1Q8N323 547 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC44A3Q8N4M1 653 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF431Q8TF32 576 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 SEC14L1Q92503 715 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 WDR77Q9BQA1 342 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 FUZQ9BT04 418 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 GNG13Q9P2W3 67 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MYPNQ86TC9 1320 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MYO5CQ9NQX4 1742 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF705EA8MWA4 302 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 MAGEB17A8MXT2 336 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 C1RP00736 705 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 CYP1A2P05177 515 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 BCKDHAP12694 445 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PKMP14618 531 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 NCBP2P52298 156 aaKnown RBP eCLIP5.77□□□□□ -1.49
RFX3-204ENST00000382004 C1QTNF8P60827 252 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 BATFQ16520 125 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 LRRC37A5PQ49AS3 106 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MLIPQ5VWP3 458 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RFWD3Q6PCD5 774 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ARL9Q6T311 187 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZNF34Q8IZ26 560 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ANKRD52Q8NB46 1076 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 BEX2Q9BXY8 128 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RHOJQ9H4E5 214 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 BEX1Q9HBH7 125 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PCDH18Q9HCL0 1135 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 RCOR3Q9P2K3 495 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 PCYOX1Q9UHG3 505 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SH2B3Q9UQQ2 575 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PCDHGB1Q9Y5G3 927 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC35F4A4IF30 521 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SSX4O60224 188 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 SLC16A8O95907 504 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ABHD2P08910 425 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 PTPRAP18433 802 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 LUMP51884 338 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 RAB4BP61018 213 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 HEPACAMQ14CZ8 416 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 GPR68Q15743 365 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 C2orf76Q3KRA6 126 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 ZACNQ401N2 412 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MAP1SQ66K74 1059 aaPredicted RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 TMEM214Q6NUQ4 689 aaKnown RBP5.77□□□□□ -1.49
RFX3-204ENST00000382004 POTEHQ6S545 545 aa5.77□□□□□ -1.49
RFX3-204ENST00000382004 MARCH9Q86YJ5 346 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms