RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 CHRM3P20309 590 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ATP6V1B2P21281 511 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KLRK1P26718 216 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 GLUD2P49448 558 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 NCS1P62166 190 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 BTN3A2P78410 334 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RIN1Q13671 783 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 NEDD8Q15843 81 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KHDC1Q4VXA5 237 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FAM46CQ5VWP2 391 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC27A1Q6PCB7 646 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC26A9Q7LBE3 791 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ELMOD2Q8IZ81 293 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CEP76Q8TAP6 659 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 UROC1Q96N76 676 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 OR2M2Q96R28 347 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF436Q9C0F3 470 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 EBF3Q9H4W6 596 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ALG2Q9H553 416 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 AHDC1Q5TGY3 1603 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LRRC14BA6NHZ5 514 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TO15178 435 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RNASEH2AO75792 299 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 HLA-DPB1P04440 258 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FPR1P21462 350 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 GALP22466 123 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RBMS1P29558 406 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SRSF11Q05519 484 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 AGKQ53H12 422 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 EIPR1Q53HC9 387 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PLPP4Q5VZY2 271 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC30A10Q6XR72 485 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CERS6Q6ZMG9 384 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 UTS2BQ765I0 119 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PHC2Q8IXK0 858 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 UTP15Q8TED0 518 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC39A13Q96H72 371 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 C8orf48Q96LL4 319 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 MGME1Q9BQP7 344 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 DHRS4Q9BTZ2 278 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC13A1Q9BZW2 595 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 EXOSC1Q9Y3B2 195 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 EFCAB9A8MZ26 197 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LATO43561 262 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SEC24DO94855 1032 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 GJB1P08034 283 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CNPP09543 421 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CD44P16070 742 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 MMP12P39900 470 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SLC16A1P53985 500 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RAG2P55895 527 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LAPTM5Q13571 262 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KCNJ8Q15842 424 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KCTD8Q6ZWB6 473 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 HDDC3Q8N4P3 179 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 COMMD1Q8N668 190 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CTRCQ99895 268 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LPIN3Q9BQK8 851 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CNPPD1Q9BV87 410 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PDGFDQ9GZP0 370 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 HDHD2Q9H0R4 259 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KCTD10Q9H3F6 313 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 DPAGT1Q9H3H5 408 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FARSBQ9NSD9 589 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LRRC37AA6NMS7 1700 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ZNF407Q9C0G0 2248 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SNNO75324 88 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LGALS2P05162 132 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 HSD3B1P14060 373 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PEX2P28328 305 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 LCN1P31025 176 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 GTF2BQ00403 316 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 AMHR2Q16671 573 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 RTL6Q6ICC9 239 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 IFNL1Q8IU54 200 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 GAB3Q8WWW8 586 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 UFD1Q92890 307 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 AZIN2Q96A70 460 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 FAM163AQ96GL9 167 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SHDQ96IW2 340 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ARHGAP9Q9BRR9 750 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 MEAF6Q9HAF1 191 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 OXSMQ9NWU1 459 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PPP4R1LQ9P1A2 415 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 NCDNQ9UBB6 729 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 A0A096LPK6 155 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 BTN3A1O00481 513 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ENDOD1O94919 500 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 CCNB2O95067 398 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 NDST3O95803 873 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 IL4RP24394 825 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SOAT1P35610 550 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 HSD17B2P37059 387 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 PSPHP78330 225 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 KLF10Q13118 480 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 TARDBPQ13148 414 aaKnown RBP eCLIP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SP140Q13342 867 aa4.8□□□□□ -1.64
PTPRD-203ENST00000381196 SMAD1Q15797 465 aaKnown RBP4.8□□□□□ -1.64
PTPRD-203ENST00000381196 ESCO2Q56NI9 601 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms