RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CSHL1Q14406 222 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 GRB7Q14451 532 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 CASP8Q14790 479 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 NR1D2Q14995 579 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.32□□□□□ -0.44
SMN1-202ENST00000380707 UBE2R2Q712K3 238 aaPredicted RBP12.32□□□□□ -0.44
SMN1-202ENST00000380707 CENPLQ8N0S6 344 aaPredicted RBP12.32□□□□□ -0.44
SMN1-202ENST00000380707 OR52E1Q8NGJ3 308 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 ZFPM2Q8WW38 1151 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 SH3KBP1Q96B97 665 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 CCDC3Q9BQI4 270 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 VPS11Q9H270 941 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 IGSF5Q9NSI5 407 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 EVA1BQ9NVM1 165 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 POLG2Q9UHN1 485 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 LGALS13Q9UHV8 139 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
SMN1-202ENST00000380707 A0A087X1B8 175 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 SPAARA0A1B0GVQ0 90 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 BTN3A1O00481 513 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 ZBTB14O43829 449 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 TOP3BO95985 862 aaKnown RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 MPOP05164 745 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 GP1BAP07359 652 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 C8GP07360 202 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 CEACAM1P13688 526 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 SLC26A3P40879 764 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 CCNFP41002 786 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 MAPK9P45984 424 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 GPR3P46089 330 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 PHKG1Q16816 387 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 KRT71Q3SY84 523 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 TAF1BQ53T94 588 aaPredicted RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 NKAIN2Q5VXU1 208 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 SBSNQ6UWP8 590 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 SPRED1Q7Z699 444 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 CCDC91Q7Z6B0 441 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 TBC1D1Q86TI0 1168 aaPredicted RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 DCUN1D3Q8IWE4 304 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 PLD6Q8N2A8 252 aaKnown RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 RIBC1Q8N443 379 aaPredicted RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 OR4E2Q8NGC2 313 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 KCTD4Q8WVF5 259 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 ANKRD7Q92527 254 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 NXNL1Q96CM4 212 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 MENTQ9BUN1 341 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 SLC12A9Q9BXP2 914 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 TFB2MQ9H5Q4 396 aaKnown RBP12.31□□□□□ -0.44
SMN1-202ENST00000380707 XKR8Q9H6D3 395 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 KCNK4Q9NYG8 393 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 PDE10AQ9Y233 779 aa12.31□□□□□ -0.44
SMN1-202ENST00000380707 IGHV1OR21-1A0A087WYE8 117 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 DCDC2BA2VCK2 349 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 NPEPPSL1A6NEC2 478 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 LILRA5A6NI73 299 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 GOLGA8RI6L899 631 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 UBXN7O94888 489 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 KLHL2O95198 593 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 KCNK5O95279 499 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 MT-ND3P03897 115 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 CATP04040 527 aaKnown RBP12.3□□□□□ -0.44
SMN1-202ENST00000380707 LTA4HP09960 611 aaKnown RBP12.3□□□□□ -0.44
SMN1-202ENST00000380707 PYGBP11216 843 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 KRT15P19012 456 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 SDHBP21912 280 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 KCNC1P48547 511 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 NOVA1P51513 510 aaKnown RBP12.3□□□□□ -0.44
SMN1-202ENST00000380707 CCL7P80098 99 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 PLCL1Q15111 1095 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 OR4D1Q15615 310 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 TSNQ15631 228 aaKnown RBP12.3□□□□□ -0.44
SMN1-202ENST00000380707 PPP1R3AQ16821 1122 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 AMZ1Q400G9 498 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 CCDC157Q569K6 752 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 CEP85LQ5SZL2 805 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 TTC23LQ6PF05 361 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 LRIG3Q6UXM1 1119 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 SH2D5Q6ZV89 423 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 CLEC14AQ86T13 490 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 SLCO6A1Q86UG4 719 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 LMNTD1Q8N9Z9 388 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 FBXO15Q8NCQ5 510 aaPredicted RBP12.3□□□□□ -0.44
SMN1-202ENST00000380707 LCN9Q8WX39 176 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 RAD51AP1Q96B01 352 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 PTERQ96BW5 349 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 GPR78Q96P69 363 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 RTKNQ9BST9 563 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 PARVBQ9HBI1 364 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 PCMTD2Q9NV79 361 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 ZNF358Q9NW07 568 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 DLL3Q9NYJ7 618 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 OGFRQ9NZT2 677 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
SMN1-202ENST00000380707 A0A1W2PQM1 296 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 MYO1CO00159 1063 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 SLC16A5O15375 505 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 RPLP0P05388 317 aaKnown RBP12.29□□□□□ -0.44
SMN1-202ENST00000380707 TYRP1P17643 537 aa12.29□□□□□ -0.44
SMN1-202ENST00000380707 TFEBP19484 476 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms