RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 SESN3P58005 492 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 UFM1P61960 85 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 AP5B1Q2VPB7 878 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 RETREG3Q86VR2 466 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 HDDC3Q8N4P3 179 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 FBXL8Q96CD0 374 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 HIC2Q96JB3 615 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 TACO1Q9BSH4 297 aaKnown RBP19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 LMCD1Q9NZU5 365 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 EPS15L1Q9UBC2 864 aa19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNF490Q9ULM2 529 aaPredicted RBP19.36■□□□□ 0.69
PDLIM5-205ENST00000380180 BBIP1A8MTZ0 92 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ADH1BP00325 375 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNF8P17098 575 aaPredicted RBP19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 C5AR1P21730 350 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ITPKAP23677 461 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 EMX2Q04743 252 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC34A1Q06495 639 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 CPSF6Q16630 551 aaKnown RBP eCLIP19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 AAK1Q2M2I8 961 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 CCSMST1Q4G0I0 132 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 SGO1Q5FBB7 561 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNF547Q8IVP9 402 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 HIPK4Q8NE63 616 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC52A3Q9NQ40 469 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ADA2Q9NZK5 511 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 MAP10Q9P2G4 905 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 STOML1Q9UBI4 398 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 PCM1Q15154 2024 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 A0A1W2PP55 124 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 E7ENX8 843 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ANHXE9PGG2 379 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 H3BM21 787 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 MANBAO00462 879 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 AP1G1O43747 822 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 FKBP6O75344 327 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC22A3O75751 556 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ME2P23368 584 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 ZFP36L2P47974 494 aaKnown RBP19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 PFN3P60673 137 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 GTF2H3Q13889 308 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 RFTN2Q52LD8 501 aaPredicted RBP19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 PDCD4Q53EL6 469 aaKnown RBP19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 PNCKQ6P2M8 343 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 HACD2Q6Y1H2 254 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 RNF165Q6ZSG1 346 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 PCYOX1LQ8NBM8 494 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 SMRP1Q8NCR6 262 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 MTFMTQ96DP5 389 aaKnown RBP19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 DNAJC11Q9NVH1 559 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 CROTQ9UKG9 612 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 TMEM98Q9Y2Y6 226 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 NDUFAF1Q9Y375 327 aa19.35■□□□□ 0.69
PDLIM5-205ENST00000380180 LIN7AO14910 233 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 RGS14O43566 566 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 CATP04040 527 aaKnown RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 XRCC1P18887 633 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 BDKRB1P46663 353 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 AP2B1P63010 937 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 WLSQ5T9L3 541 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 KIAA1211LQ6NV74 962 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 C8orf82Q6P1X6 216 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 TRIM46Q7Z4K8 759 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC26A7Q8TE54 656 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 USP7Q93009 1102 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 ROPN1LQ96C74 230 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 ZNF514Q96K75 400 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 CCDC138Q96M89 665 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 FOPNLQ96NB1 174 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC29A3Q9BZD2 475 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 HEBP1Q9NRV9 189 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 CIDEBQ9UHD4 219 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 GPR34Q9UPC5 381 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 CROCCQ5TZA2 2017 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC28A1O00337 649 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 ANGPT2O15123 496 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 VEGFDO43915 354 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 POP7O75817 140 aaKnown RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 RPS14P62263 151 aaKnown RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 MS4A2Q01362 244 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 WSCD2Q2TBF2 565 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 SLC44A4Q53GD3 710 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 AAGABQ6PD74 315 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 ADAMTSL4Q6UY14 1074 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 PROKR1Q8TCW9 393 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 TSPEARQ8WU66 669 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 PYDC1Q8WXC3 89 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 JADE3Q92613 823 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 SPDL1Q96EA4 605 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 COX14Q96I36 57 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 LRCH3Q96II8 777 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 LINC00615Q96LM1 132 aaPredicted RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 PPP3R2Q96LZ3 170 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 S100A14Q9HCY8 104 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 INTS7Q9NVH2 962 aaKnown RBP19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 ZIM2Q9NZV7 527 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 MTCH2Q9Y6C9 303 aa19.34■□□□□ 0.69
PDLIM5-205ENST00000380180 PRAMEF4O60810 478 aa19.33■□□□□ 0.68
PDLIM5-205ENST00000380180 RNASEH2AO75792 299 aaKnown RBP19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms