RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 GPS1Q13098 491 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 SDCCAG8Q86SQ7 713 aaPredicted RBP23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 SLC22A15Q8IZD6 547 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 CFAP61Q8NHU2 1237 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 MAGOHBQ96A72 148 aaKnown RBP23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 TRAPPC9Q96Q05 1148 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 AP1M1Q9BXS5 423 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 GPR87Q9BY21 358 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 ACTL8Q9H568 366 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 MRM3Q9HC36 420 aaKnown RBP23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 TREX1Q9NSU2 369 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 SYBUQ9NX95 663 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 OR6C2Q9NZP2 312 aa23.88■■□□□ 1.41
TNFRSF4-201ENST00000379236 HELZ2Q9BYK8 2649 aaKnown RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 CHRM5P08912 532 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 PVRP15151 417 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 UGT2B7P16662 529 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 NFKB2Q00653 900 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 MRNIPQ6NTE8 343 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 CASC4Q6P4E1 433 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 FAM199XQ6PEV8 388 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 LRRC6Q86X45 466 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 KRT222Q8N1A0 295 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 C19orf47Q8N9M1 422 aaKnown RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 C9orf43Q8TAL5 461 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 SKA2Q8WVK7 121 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 SAMD15Q9P1V8 674 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 MARCH4Q9P2E8 410 aaPredicted RBP23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 PLAGL1Q9UM63 463 aa23.87■■□□□ 1.41
TNFRSF4-201ENST00000379236 IQCF5A8MTL0 148 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 ISM1B1AKI9 464 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 TERTO14746 1132 aaKnown RBP23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 KPNA5O15131 536 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 ZSCAN12O43309 604 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 PAMP19021 973 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 EIF3BP55884 814 aaKnown RBP23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 ITGA1P56199 1179 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 TTC23LQ6PF05 361 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 GPR135Q8IZ08 494 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 LKAAEAR1Q8TD35 194 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 ACTR5Q9H9F9 607 aaPredicted RBP23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 GRPEL1Q9HAV7 217 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 SOX13Q9UN79 622 aa23.86■■□□□ 1.41
TNFRSF4-201ENST00000379236 E7EQ34 232 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 PGRMC1O00264 195 aaKnown RBP23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 VAPBO95292 243 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 MSL3P1P0C860 447 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 PTPN4P29074 926 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 ABRQ12979 859 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 GPS2Q13227 327 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 RNF187Q5TA31 235 aaPredicted RBP23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 UNC5DQ6UXZ4 953 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 ATG14Q6ZNE5 492 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 TRIM73Q86UV7 250 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 DCUN1D3Q8IWE4 304 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 RASGEF1CQ8N431 466 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 OR1L3Q8NH93 324 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 MFSD3Q96ES6 412 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 TCTN2Q96GX1 697 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 MS4A14Q96JA4 679 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 KIFC1Q9BW19 673 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 IRAK4Q9NWZ3 460 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 MAN2B2Q9Y2E5 1009 aa23.85■■□□□ 1.41
TNFRSF4-201ENST00000379236 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 A0A0J9YY10 115 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 GOLGA6L10A0A0M3HER8 536 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 TCRBV7S3A2A0A539 114 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 RECKO95980 971 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 HBQ1P09105 142 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 AOAHP28039 575 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 RAB28P51157 221 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 KCNJ11Q14654 390 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 KIR2DS3Q14952 304 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 CCDC137Q6PK04 289 aaKnown RBP23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 CES3Q6UWW8 571 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 OTOAQ7RTW8 1153 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 SYVN1Q86TM6 617 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 LRFN5Q96NI6 719 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 OR2A14Q96R47 310 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 SPHK1Q9NYA1 384 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 SLC39A10Q9ULF5 831 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 FARSAQ9Y285 508 aaKnown RBP23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 MRFAP1Q9Y605 127 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 KCNMB2Q9Y691 235 aa23.84■■□□□ 1.41
TNFRSF4-201ENST00000379236 MEN1O00255 615 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 GPC4O75487 556 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 RPS3P23396 243 aaKnown RBP eCLIP23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 RPS18P62269 152 aaKnown RBP23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 KCTD19Q17RG1 926 aaPredicted RBP23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 PRAMEF17Q5VTA0 474 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 CDHR3Q6ZTQ4 885 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 PTRH1Q86Y79 214 aaKnown RBP23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 VRK3Q8IV63 474 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 DSELQ8IZU8 1212 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 RAB42Q8N4Z0 105 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 FOPNLQ96NB1 174 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 RUFY1Q96T51 708 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 P2RY12Q9H244 342 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 CHST8Q9H2A9 424 aa23.83■■□□□ 1.41
TNFRSF4-201ENST00000379236 AKIRIN1Q9H9L7 192 aaPredicted RBP23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms