RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 NODALQ96S42 347 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 BARD1Q99728 777 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 NEURL2Q9BR09 285 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 SYT17Q9BSW7 474 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 GPR63Q9BZJ6 419 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ARHGAP39Q9C0H5 1083 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 CLMPQ9H6B4 373 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 TRNAU1APQ9NX07 287 aaKnown RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 WWOXQ9NZC7 414 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 BLOC1S6Q9UL45 172 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ZNF490Q9ULM2 529 aaPredicted RBP12.95□□□□□ -0.34
ACTN1-202ENST00000376839 ANGPTL3Q9Y5C1 460 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 PCDHB14Q9Y5E9 798 aa12.95□□□□□ -0.34
ACTN1-202ENST00000376839 TRBV5-3A0A0A0MS03 114 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 H0Y626 953 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 GAPDHSO14556 408 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 TOR1BO14657 336 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SEC22BO75396 215 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SERPINB7O75635 380 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SCELO95171 688 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 TRIM16O95361 564 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 GSNP06396 782 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 IRF1P10914 325 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 CORO1AP31146 461 aaKnown RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 NRIP1P48552 1158 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 VAC14Q08AM6 782 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 GALNT5Q7Z7M9 940 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 TMCO5AQ8N6Q1 288 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 OR5K1Q8NHB7 308 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 CLPBQ9H078 707 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 LRTM1Q9HBL6 345 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 C3orf18Q9UK00 162 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 GABRQQ9UN88 632 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 NAALAD2Q9Y3Q0 740 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SNX5Q9Y5X3 404 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 LOC730098B7Z3J9 87 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 NT5C1B-RDH14C9J2C7 533 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 PRAMEF1O95521 474 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ITIH1P19827 911 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 GNPDA1P46926 289 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 RAD23AP54725 363 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 GSTM4Q03013 218 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 RAPSNQ13702 412 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ANKRD46Q86W74 232 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ADHFE1Q8IWW8 467 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ZCCHC7Q8N3Z6 543 aaKnown RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 OR6K2Q8NGY2 324 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SH3YL1Q96HL8 342 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 INIPQ9NRY2 104 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 MARCH5Q9NX47 278 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 OPTCQ9UBM4 332 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 LHX3Q9UBR4 397 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 FCF1Q9Y324 198 aaKnown RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 OARD1Q9Y530 152 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 PCDHB1Q9Y5F3 818 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SEPT4O43236 478 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 COCHO43405 550 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ADAM23O75077 832 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ULK1O75385 1050 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SLC25A14O95258 325 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 IL6P05231 212 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 CKBP12277 381 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 MYCLP1P12525 358 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 MZF1P28698 734 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 HUNKP57058 714 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SPIDRQ14159 915 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 CACHD1Q5VU97 1274 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 SNX29P2Q8IUI4 249 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 PLPP6Q8IY26 295 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 PARP8Q8N3A8 854 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 ARL10Q8N8L6 244 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 CPPED1Q9BRF8 314 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 INPP5KQ9BT40 448 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 FAM126AQ9BYI3 521 aaPredicted RBP12.94□□□□□ -0.34
ACTN1-202ENST00000376839 CD244Q9BZW8 370 aa12.94□□□□□ -0.34
ACTN1-202ENST00000376839 A0A1B0GVM2 712 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 SLC28A1O00337 649 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 MANBAO00462 879 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 BCKDKO14874 412 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 ADAM12O43184 909 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 FZD6O60353 706 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 NDUFS2O75306 463 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 STC2O76061 302 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 C1QCP02747 245 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 FTH1P02794 183 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 RETP07949 1114 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 BCKDHAP12694 445 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 CYP4B1P13584 511 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 ALDH4A1P30038 563 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 GZMMP51124 257 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 IL5RAQ01344 420 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 EMX1Q04741 257 aaPredicted RBP12.93□□□□□ -0.34
ACTN1-202ENST00000376839 CDK5R2Q13319 367 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 USP39Q53GS9 565 aaKnown RBP12.93□□□□□ -0.34
ACTN1-202ENST00000376839 CST9Q5W186 159 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 LAIR1Q6GTX8 287 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 CES5AQ6NT32 575 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 NIPAL1Q6NVV3 410 aa12.93□□□□□ -0.34
ACTN1-202ENST00000376839 PRSS55Q6UWB4 352 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms