RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 AKTIPQ9H8T0 292 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 DNAJC11Q9NVH1 559 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 COPG1Q9Y678 874 aaKnown RBP10.84□□□□□ -0.67
PDPN-202ENST00000376057 PDE4DIPQ5VU43 2346 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 KCNE1BA0A087WTH5 132 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 PIP5K1BO14986 540 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 CLDN9O95484 217 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 GUCA1CO95843 209 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 COX4I1P13073 169 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 LBPP18428 481 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 PFN3P60673 137 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 FZD5Q13467 585 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 CFAP206Q8IYR0 622 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 GANCQ8TET4 914 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 SETD7Q8WTS6 366 aaKnown RBP10.84□□□□□ -0.67
PDPN-202ENST00000376057 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 METTL2AQ96IZ6 378 aaKnown RBP10.84□□□□□ -0.67
PDPN-202ENST00000376057 LGR4Q9BXB1 951 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 PCED1AQ9H1Q7 454 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 TAS2R1Q9NYW7 299 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 TSC22D4Q9Y3Q8 395 aa10.84□□□□□ -0.67
PDPN-202ENST00000376057 A0A1B0GTL3 188 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TCRBV21S2A2A0A5A6 115 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 SLC28A1O00337 649 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 DCXO43602 365 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 CCNT2O60583 730 aaKnown RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 CRCPO75575 148 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 OR4F21O95013 312 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 PAK4O96013 591 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 CEACAM5P06731 702 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 CCND1P24385 295 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 PIK3R1P27986 724 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 CPOXP36551 454 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 PNLIPRP1P54315 467 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 CAPRIN2Q6IMN6 1127 aaKnown RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 LPCAT2Q7L5N7 544 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 GJD3Q8N144 294 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 OR52B6Q8NGF0 335 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 C3orf30Q96M34 536 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 UHRF1Q96T88 793 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 IER2Q9BTL4 223 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D10AQ9BXI6 508 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 ZDHHC5Q9C0B5 715 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 BRINP2Q9C0B6 783 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 BTBD1Q9H0C5 482 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 EHD1Q9H4M9 534 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 NDE1Q9NXR1 346 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 STOX2Q9P2F5 926 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 POLG2Q9UHN1 485 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 DMTF1Q9Y222 760 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 CCL27Q9Y4X3 112 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 ANGPTL3Q9Y5C1 460 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3DA0A087WVF3 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3IA0A087WXS9 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3EA0A087X179 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3KA0A087X1G2 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3FA6NER0 549 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3LB9A6J9 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 GSC2O15499 205 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3HP0C7X1 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 IDO1P14902 403 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TSPAN8P19075 237 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 KELP23276 732 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 PDHA2P29803 388 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 PRDX3P30048 256 aaKnown RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 CCDC85BQ15834 202 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 C18orf21Q32NC0 220 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 COQ5Q5HYK3 327 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3GQ6DHY5 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3CQ6IPX1 549 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TRIM74Q86UV6 250 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 LRRC56Q8IYG6 542 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 TBC1D3Q8IZP1 549 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 ARHGAP24Q8N264 748 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 CFAP61Q8NHU2 1237 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 FAM161BQ96MY7 647 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 PKP4Q99569 1192 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 SGPP1Q9BX95 441 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 SDR39U1Q9NRG7 319 aaPredicted RBP10.83□□□□□ -0.68
PDPN-202ENST00000376057 LAMA3Q16787 3333 aa10.83□□□□□ -0.68
PDPN-202ENST00000376057 TRPM6Q9BX84 2022 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 ZNF839A8K0R7 811 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 CACNB4O00305 520 aaPredicted RBP10.82□□□□□ -0.68
PDPN-202ENST00000376057 SKAP2O75563 359 aaPredicted RBP10.82□□□□□ -0.68
PDPN-202ENST00000376057 PREPP48147 710 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 RAP1GDS1P52306 607 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 ABRQ12979 859 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 PTCHD3Q3KNS1 767 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 PYCR3Q53H96 274 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 AGTRAPQ6RW13 159 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 WASH2PQ6VEQ5 465 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 HACD2Q6Y1H2 254 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 RINLQ6ZS11 566 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 OR9A1PQ8NGU1 263 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 METTL6Q8TCB7 284 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 WASH6PQ9NQA3 447 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.82□□□□□ -0.68
PDPN-202ENST00000376057 SPATA7Q9P0W8 599 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 TMEM98Q9Y2Y6 226 aa10.82□□□□□ -0.68
PDPN-202ENST00000376057 MYO9BQ13459 2157 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms