RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 ZNF181Q2M3W8 571 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 LAIR1Q6GTX8 287 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 TMC5Q6UXY8 1006 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 PLD3Q8IV08 490 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 ZNF683Q8IZ20 524 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 FBXO30Q8TB52 745 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 SERPINB11Q96P15 392 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 USE1Q9NZ43 259 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 OPTCQ9UBM4 332 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 DNAJB9Q9UBS3 223 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 TLR6Q9Y2C9 796 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 COL4A6Q14031 1691 aa12.68□□□□□ -0.38
MSH5-204ENST00000375755 GJB5O95377 273 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 ANGPTL1O95841 491 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 POLR2EP19388 210 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 ADRA1AP35348 466 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 RACK1P63244 317 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 DEFB103AP81534 67 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 IL5RAQ01344 420 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 RAPSNQ13702 412 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 FBXO48Q5FWF7 155 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 TTC23LQ6PF05 361 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 SCIMPQ6UWF3 145 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 HID1Q8IV36 788 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 CCDC103Q8IW40 242 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 CELF2-AS1Q8N7Q2 184 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 HMCESQ96FZ2 354 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 FBXO44Q9H4M3 255 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 GLOD4Q9HC38 313 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 MARCH2Q9P0N8 246 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 EIF3LQ9Y262 564 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 SPTBN5Q9NRC6 3674 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 PABPN1LA6NDY0 278 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 OR6C75A6NL08 312 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 CXCL10P02778 98 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 COL6A1P12109 1028 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 HOXC13P31276 330 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 CCDC58Q4VC31 144 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 SYT6Q5T7P8 510 aaPredicted RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 NADSYN1Q6IA69 706 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 FBXL22Q6P050 247 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 B3GNT8Q7Z7M8 397 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 NUDT8Q8WV74 236 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 ZNF566Q969W8 418 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 RBM4BQ9BQ04 359 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 RBM4Q9BWF3 364 aaKnown RBP12.67□□□□□ -0.38
MSH5-204ENST00000375755 OR2B2Q9GZK3 357 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 COMMD8Q9NX08 183 aa12.67□□□□□ -0.38
MSH5-204ENST00000375755 CCL22O00626 93 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 FADS2O95864 444 aaKnown RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 MT-ND2P03891 347 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 KRT8P05787 483 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 PRR35P0CG20 571 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 PRKCAP17252 672 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 GGT1P19440 569 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 MAGEA11P43364 429 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 OR4D1Q15615 310 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 TRIP4Q15650 581 aaPredicted RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 CCBE1Q6UXH8 406 aaPredicted RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 DLEU7Q6UYE1 221 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 CHAC2Q8WUX2 184 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 ZHX1-C8orf76Q96EF9 292 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 TSGA13Q96PP4 275 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 FCRL5Q96RD9 977 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 MOSPD1Q9UJG1 213 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 UGT2A1Q9Y4X1 527 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 AGAP5A6NIR3 686 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 SLC38A8A6NNN8 435 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 TAF4O00268 1085 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 ANXA9O76027 345 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 PTTG1O95997 202 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 SLC4A1P02730 911 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 FTH1P02794 183 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 MTHFD2P13995 350 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 CD1DP15813 335 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 RYKP34925 604 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 ARL1P40616 181 aaPredicted RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 PRMT2P55345 433 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 PCSK7Q16549 785 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 GDPD3Q7L5L3 318 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 SPATA19Q7Z5L4 167 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 RTL3Q8N8U3 475 aaKnown RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 FBLIM1Q8WUP2 373 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 FIG4Q92562 907 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 PROX1Q92786 737 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 WBP2Q969T9 261 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 REXO5Q96IC2 774 aaKnown RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 ASB2Q96Q27 587 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 RBM22Q9NW64 420 aaKnown RBP eCLIP12.66□□□□□ -0.382e-13■■■■■ 57.4
MSH5-204ENST00000375755 SMPD4Q9NXE4 827 aa12.66□□□□□ -0.38
MSH5-204ENST00000375755 TMEFF2Q9UIK5 374 aaPredicted RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 CAB39Q9Y376 341 aaPredicted RBP12.66□□□□□ -0.38
MSH5-204ENST00000375755 GNGT2O14610 69 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 BCKDKO14874 412 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 KMOO15229 486 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 TLR5O60602 858 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 MFN2O95140 757 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 ACRP10323 421 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 ITGB6P18564 788 aa12.65□□□□□ -0.38
MSH5-204ENST00000375755 ST13P50502 369 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms