RNA–Protein interactions for RNA: ENST00000375663.7

VARS-215, Transcript of valyl-tRNA synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-215ENST00000375663 C10orf53Q8N6V4 93 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 PNPLA1Q8N8W4 532 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 HDAC2Q92769 488 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 ZNF607Q96SK3 696 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 IL12RB2Q99665 862 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 WDR83Q9BRX9 315 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 ANKRD60Q9BZ19 345 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 MYH9P35579 1960 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 FZD9O00144 591 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 LSM1O15116 133 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 STX11O75558 287 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 PCDH8O95206 1070 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 PCSK2P16519 638 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 ARSDP51689 593 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 MVKQ03426 396 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 C2orf80Q0P641 193 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 DPY19L1Q2PZI1 675 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 ALFQ53S48 1182 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 MS4A13Q5J8X5 152 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 BLOC1S3Q6QNY0 202 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 ZNF534Q76KX8 674 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 FGD2Q7Z6J4 655 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 DIRAS2Q96HU8 199 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 C8orf48Q96LL4 319 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 ABCB9Q9NP78 766 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 RIMS3Q9UJD0 308 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 FAM240BA0A1B0GVZ2 78 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 AURKAO14965 403 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 SYN3O14994 580 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 RPN2P04844 631 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 NSG1P42857 185 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 CDKN2DP55273 166 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 SH3BP2P78314 561 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 UPF1Q92900 1129 aaKnown RBP eCLIP16.49■□□□□ 0.23
VARS-215ENST00000375663 SPATA5L1Q9BVQ7 753 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 PCDHGB3Q9Y5G1 929 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 SPACA6W5XKT8 324 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 XPNPEP2O43895 674 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 F2P00734 622 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 EPOP01588 193 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 HSD17B1P14061 328 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 HTR1EP28566 365 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 HOXA11P31270 313 aaPredicted RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 PTPN5P54829 565 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 DNASE1L3Q13609 305 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 GK3PQ14409 553 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 ANGPT1Q15389 498 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 TEAD4Q15561 434 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 GOLGA7Q7Z5G4 137 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 RHEBL1Q8TAI7 183 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 RAD18Q9NS91 495 aa16.49■□□□□ 0.23
VARS-215ENST00000375663 RUVBL1Q9Y265 456 aaKnown RBP16.49■□□□□ 0.23
VARS-215ENST00000375663 ANKRD36CQ5JPF3 1778 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 CASKO14936 926 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SLC28A2O43868 658 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 AP2A2O94973 939 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 CDK4P11802 303 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 CXCR2P25025 360 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SEMG2Q02383 582 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 MXD1Q05195 221 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 PIGFQ07326 219 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 IL18R1Q13478 541 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 IFI44LQ53G44 452 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 CAPN13Q6MZZ7 669 aaPredicted RBP16.48■□□□□ 0.23
VARS-215ENST00000375663 USP43Q70EL4 1123 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 COLGALT2Q8IYK4 626 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SCAIQ8N9R8 606 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SUSD3Q96L08 255 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 RDH12Q96NR8 316 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 KIAA1522Q9P206 1035 aaPredicted RBP16.48■□□□□ 0.23
VARS-215ENST00000375663 ADAMTS5Q9UNA0 930 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 OR2AG2A6NM03 316 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 ANKRD66B4E2M5 251 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 ERAL1O75616 437 aaKnown RBP16.48■□□□□ 0.23
VARS-215ENST00000375663 ASGR1P07306 291 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 BUD31P41223 144 aaPredicted RBP16.48■□□□□ 0.23
VARS-215ENST00000375663 OR4D2P58180 307 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 TYSND1Q2T9J0 566 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 OR4F3Q6IEY1 312 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 LCN8Q6JVE9 175 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SLC22A16Q86VW1 577 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 GOLM1Q8NBJ4 401 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 HAPLN1P10915 354 aaPredicted RBP16.48■□□□□ 0.23
VARS-215ENST00000375663 PRPS1L1P21108 318 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 MYF6P23409 242 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 KCNQ1P51787 676 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SCN1BQ07699 218 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 CYP2U1Q7Z449 544 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 ZNF467Q7Z7K2 595 aaPredicted RBP16.48■□□□□ 0.23
VARS-215ENST00000375663 ISCA2Q86U28 154 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 CACUL1Q86Y37 369 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 KCNS3Q9BQ31 491 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 TUBA1CQ9BQE3 449 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 DUSP26Q9BV47 211 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 AIG1Q9NVV5 245 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 SEC14L3Q9UDX4 400 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 WDR37Q9Y2I8 494 aa16.48■□□□□ 0.23
VARS-215ENST00000375663 LOC730098B7Z3J9 87 aa16.47■□□□□ 0.23
VARS-215ENST00000375663 INMTO95050 263 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms