RNA–Protein interactions for RNA: ENST00000375499.7

SDHB-201, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDHB, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-201ENST00000375499 ANAPC5Q9UJX4 755 aa15.11■□□□□ 0.01
SDHB-201ENST00000375499 RARRES3Q9UL19 164 aa15.11■□□□□ 0.01
SDHB-201ENST00000375499 RPS6KL1Q9Y6S9 549 aa15.11■□□□□ 0.01
SDHB-201ENST00000375499 CES2O00748 559 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 NKX2-8O15522 239 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 CDH3P22223 829 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 RPS3P23396 243 aaKnown RBP eCLIP15.1■□□□□ 0.017e-7■■■□□ 19.2
SDHB-201ENST00000375499 AOAHP28039 575 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 EIF3BP55884 814 aaKnown RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 ABRQ12979 859 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 PRKAA1Q13131 559 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 UBAP2LQ14157 1087 aaKnown RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 TBR1Q16650 682 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 ATP1A1-AS1Q5TC04 95 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 ZNF449Q6P9G9 518 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 UNC5AQ6ZN44 842 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 TBC1D21Q8IYX1 336 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 OTUD6BQ8N6M0 293 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 MCUQ8NE86 351 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 LPGAT1Q92604 370 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 ZNF669Q96BR6 464 aaPredicted RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 ZNF501Q96CX3 271 aaPredicted RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 SLC45A3Q96JT2 553 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 BIRC8Q96P09 236 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 NAP1L3Q99457 506 aaPredicted RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 TTC1Q99614 292 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 PITPNM3Q9BZ71 974 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 TRIM4Q9C037 500 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 TWSG1Q9GZX9 223 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 C1GALT1Q9NS00 363 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 SOHLH2Q9NX45 425 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 ANKMY1Q9P2S6 941 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 CROTQ9UKG9 612 aa15.1■□□□□ 0.01
SDHB-201ENST00000375499 RUVBL2Q9Y230 463 aaKnown RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 TDRKHQ9Y2W6 561 aaKnown RBP15.1■□□□□ 0.01
SDHB-201ENST00000375499 ZCWPW2A0A1B0GU75 182 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 AP3B1O00203 1094 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 HCRTR1O43613 425 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 NIPSNAP2O75323 286 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 BANF1O75531 89 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 SLCO2B1O94956 709 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 PRKAR1AP10644 381 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 GP1BBP13224 206 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 UGT2B7P16662 529 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 TUBB4BP68371 445 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 ACY1Q03154 408 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 TUBB2AQ13885 445 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 GRB7Q14451 532 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 ZIC1Q15915 447 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 RNASEH2BQ5TBB1 312 aaKnown RBP15.09■□□□□ 0.01
SDHB-201ENST00000375499 PTRHD1Q6GMV3 140 aaKnown RBP15.09■□□□□ 0.01
SDHB-201ENST00000375499 CASC4Q6P4E1 433 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 C6orf15Q6UXA7 325 aaPredicted RBP15.09■□□□□ 0.01
SDHB-201ENST00000375499 CENPUQ71F23 418 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 FAM20CQ8IXL6 584 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 ESX1Q8N693 406 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 STARD8Q92502 1023 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 FAM136AQ96C01 138 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 STAMBPL1Q96FJ0 436 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 CAPZA3Q96KX2 299 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 TRAPPC9Q96Q05 1148 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 OR2A14Q96R47 310 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 TUBB2BQ9BVA1 445 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 TRIT1Q9H3H1 467 aaKnown RBP15.09■□□□□ 0.01
SDHB-201ENST00000375499 PDE7BQ9NP56 450 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 GALPQ9UBC7 116 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 GNPTGQ9UJJ9 305 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 NFS1Q9Y697 457 aa15.09■□□□□ 0.01
SDHB-201ENST00000375499 SEC16AO15027 2179 aa15.08■□□□□ 0.01
SDHB-201ENST00000375499 FAM237BA0A1B0GVD1 139 aa15.08■□□□□ 0
SDHB-201ENST00000375499 MATN2O00339 956 aa15.08■□□□□ 0
SDHB-201ENST00000375499 NDUFS3O75489 264 aa15.08■□□□□ 0
SDHB-201ENST00000375499 CHRM5P08912 532 aaPredicted RBP15.08■□□□□ 0
SDHB-201ENST00000375499 FAM87AP0C7U9 286 aa15.08■□□□□ 0
SDHB-201ENST00000375499 MLNP12872 115 aa15.08■□□□□ 0
SDHB-201ENST00000375499 OAS2P29728 719 aaKnown RBP15.08■□□□□ 0
SDHB-201ENST00000375499 PKLRP30613 574 aa15.08■□□□□ 0
SDHB-201ENST00000375499 FMO4P31512 558 aa15.08■□□□□ 0
SDHB-201ENST00000375499 DLSTP36957 453 aa15.08■□□□□ 0
SDHB-201ENST00000375499 PPARGP37231 505 aaPredicted RBP15.08■□□□□ 0
SDHB-201ENST00000375499 PTGIRP43119 386 aa15.08■□□□□ 0
SDHB-201ENST00000375499 ARL4DP49703 201 aa15.08■□□□□ 0
SDHB-201ENST00000375499 PLOD1Q02809 727 aaPredicted RBP15.08■□□□□ 0
SDHB-201ENST00000375499 DHX34Q14147 1143 aaKnown RBP15.08■□□□□ 0
SDHB-201ENST00000375499 DEFB110Q30KQ9 67 aa15.08■□□□□ 0
SDHB-201ENST00000375499 ANKRD20A4Q4UJ75 823 aa15.08■□□□□ 0
SDHB-201ENST00000375499 SPESP1Q6UW49 350 aa15.08■□□□□ 0
SDHB-201ENST00000375499 CDHR3Q6ZTQ4 885 aa15.08■□□□□ 0
SDHB-201ENST00000375499 CREG2Q8IUH2 290 aa15.08■□□□□ 0
SDHB-201ENST00000375499 CILP2Q8IUL8 1156 aa15.08■□□□□ 0
SDHB-201ENST00000375499 CARFQ8N187 725 aa15.08■□□□□ 0
SDHB-201ENST00000375499 LINC01555Q8NAE3 123 aa15.08■□□□□ 0
SDHB-201ENST00000375499 SLC38A9Q8NBW4 561 aa15.08■□□□□ 0
SDHB-201ENST00000375499 OR1L3Q8NH93 324 aa15.08■□□□□ 0
SDHB-201ENST00000375499 CFAP61Q8NHU2 1237 aa15.08■□□□□ 0
SDHB-201ENST00000375499 SIGLEC10Q96LC7 697 aa15.08■□□□□ 0
SDHB-201ENST00000375499 IL17FQ96PD4 163 aa15.08■□□□□ 0
SDHB-201ENST00000375499 FAM60AQ9NP50 221 aa15.08■□□□□ 0
SDHB-201ENST00000375499 LHX9Q9NQ69 397 aa15.08■□□□□ 0
SDHB-201ENST00000375499 TSR3Q9UJK0 312 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms