RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 LRTOMTQ8WZ04 291 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 TCEAL4Q96EI5 215 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 MIPEPQ99797 713 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 SPO11Q9Y5K1 396 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 N6AMT1Q9Y5N5 214 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 USP3Q9Y6I4 520 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 ZCWPW2A0A1B0GU75 182 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 MTHFD1P11586 935 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 MYCLP1P12525 358 aaPredicted RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 XRCC1P18887 633 aaPredicted RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 NT5EP21589 574 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 PPIBP23284 216 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 GTF2E2P29084 291 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CDKN1CP49918 316 aaPredicted RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 LSM3P62310 102 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 PPP1R3AQ16821 1122 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 TSPAN14Q8NG11 270 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 OTUB2Q96DC9 234 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 VPS29Q9UBQ0 182 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CORO2BQ9UQ03 480 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 MATN2O00339 956 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 PLK4O00444 970 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CDKN2DP55273 166 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 PROSER1Q86XN7 944 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 ARMC8Q8IUR7 673 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 EPB41L4BQ9H329 900 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 EBF2Q9HAK2 575 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 MRPS33Q9Y291 106 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CCDC189A1A4V9 331 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 TMEM189-UBE2V1I3L0A0 370 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 HNRNPCP07910 306 aaKnown RBP eCLIP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 MTHFRP42898 656 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 AP1S2P56377 157 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 RIPK1Q13546 671 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 TOMM20Q15388 145 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF805Q5CZA5 627 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF776Q68DI1 518 aaPredicted RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 TMEM214Q6NUQ4 689 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 RNF44Q7L0R7 432 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 GOLGA7Q7Z5G4 137 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 KIAA2013Q8IYS2 634 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CYP4Z2PQ8N1L4 340 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 CBR4Q8N4T8 237 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 C1orf52Q8N6N3 182 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 SRFBP1Q8NEF9 429 aaKnown RBP17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 SMARCD2Q92925 531 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 RTP4Q96DX8 246 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC38A3Q99624 504 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 BTBD1Q9H0C5 482 aa17.59■□□□□ 0.41
PTPDC1-202ENST00000375360 PCDH7O60245 1069 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 SLC35G6P0C7Q6 338 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 ATF6P18850 670 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 MBOAT1Q6ZNC8 495 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 ARHGAP12Q8IWW6 846 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 ZNF607Q96SK3 696 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 FNDC11Q9BVV2 318 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 POLR1BQ9H9Y6 1135 aa17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 AKAP7Q9P0M2 348 aaPredicted RBP17.58■□□□□ 0.41
PTPDC1-202ENST00000375360 AP3D1O14617 1153 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 TSPAN6O43657 245 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 KAT7O95251 611 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 KCNA5P22460 613 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 RXRGP48443 463 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 DIO3P55073 304 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 UFM1P61960 85 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 HERC2P3Q9BVR0 1158 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 TTLL2Q9BWV7 592 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 RASSF1Q9NS23 344 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 DHRS7Q9Y394 339 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 LOC100506127A0A0U1RQW1 187 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 MEF2AQ02078 507 aaPredicted RBP17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 DSC3Q14574 896 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 AMZ1Q400G9 498 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 ATP13A5Q4VNC0 1218 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 SLC8B1Q6J4K2 584 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 TNFAIP8L2Q6P589 184 aaPredicted RBP17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 ZNF641Q96N77 438 aaPredicted RBP17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 SPATA5L1Q9BVQ7 753 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 SLC46A2Q9BY10 475 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 KATNBL1Q9H079 304 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 NKX2-4Q9H2Z4 354 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 OR51B5Q9H339 312 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 CTPS2Q9NRF8 586 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 FADS3Q9Y5Q0 445 aa17.58■□□□□ 0.4
PTPDC1-202ENST00000375360 G3V2T6 193 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 HNRNPA1P09651 372 aaKnown RBP eCLIP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 RYKP34925 604 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 GUCA1AP43080 201 aaPredicted RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 HEPACAMQ14CZ8 416 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 C6orf52Q5T4I8 152 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 BEND5Q7L4P6 421 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 KCT2Q8NC54 265 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 ITM2CQ9NQX7 267 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 IKZF3Q9UKT9 509 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 MAGEB17A8MXT2 336 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 hCG_2039718K7EN88 272 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 ZBTB11O95625 1053 aaPredicted RBP17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 IFNGR2P38484 337 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 SEMA3AQ14563 771 aa17.57■□□□□ 0.4
PTPDC1-202ENST00000375360 RAB41Q5JT25 222 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms