RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 C2orf80Q0P641 193 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 TEAD4Q15561 434 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 BTBD8Q5XKL5 378 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CORO6Q6QEF8 472 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CXXC5Q7LFL8 322 aaKnown RBP10.06□□□□□ -0.8
CD28-202ENST00000374481 KCTD20Q7Z5Y7 419 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 METTL23Q86XA0 190 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 PDZD9Q8IXQ8 264 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FTMTQ8N4E7 242 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 DCBLD1Q8N8Z6 715 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 A8MT66 165 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 SLC22A5O76082 557 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 AP2A1O95782 977 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 SHMT2P34897 504 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CBX5P45973 191 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 UGT2B15P54855 530 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 GPR85P60893 370 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ERVK-25P63136 954 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ST3GAL4Q11206 333 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 GPR19Q15760 415 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ADPRMQ3LIE5 342 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 PIK3R6Q5UE93 754 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 PMF1Q6P1K2 205 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 USP45Q70EL2 814 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 BRINP3Q76B58 766 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 STRADAQ7RTN6 431 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 SSX6Q7RTT6 188 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 GALNT13Q8IUC8 556 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FANK1Q8TC84 345 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ST8SIA4Q92187 359 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 DDX1Q92499 740 aaKnown RBP10.06□□□□□ -0.8
CD28-202ENST00000374481 MGLLQ99685 303 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 WDR18Q9BV38 432 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.06□□□□□ -0.8
CD28-202ENST00000374481 GIMAP2Q9UG22 337 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 HRH3Q9Y5N1 445 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 UBR1Q8IWV7 1749 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CTDSP2O14595 271 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 OR10H3O60404 316 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FPR1P21462 350 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 NMBRP28336 390 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CYP2C18P33260 490 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 HTR3AP46098 478 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ZNF33BQ06732 778 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FADDQ13158 208 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 RAPSNQ13702 412 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 USP41Q3LFD5 358 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FLYWCH1Q4VC44 716 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FBXO48Q5FWF7 155 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 GDPD3Q7L5L3 318 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 UBQLNLQ8IYU4 475 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 GLB1L3Q8NCI6 653 aaPredicted RBP10.06□□□□□ -0.8
CD28-202ENST00000374481 STYXQ8WUJ0 223 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 SLC13A3Q8WWT9 602 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 HBEGFQ99075 208 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 PFDN5Q99471 154 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 SLC2A11Q9BYW1 496 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 MCCC2Q9HCC0 563 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 TREM1Q9NP99 234 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 NT5MQ9NPB1 228 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 AKIP1Q9NQ31 210 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 FBXO8Q9NRD0 319 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 TMPRSS11EQ9UL52 423 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 TNPO3Q9Y5L0 923 aaKnown RBP10.06□□□□□ -0.8
CD28-202ENST00000374481 NALCNQ8IZF0 1738 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 BBOX1O75936 387 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ARNTP27540 789 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 CDH18Q13634 790 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ARHGEF7Q14155 803 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 AMHR2Q16671 573 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 HECTD2Q5U5R9 776 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 MSANTD2Q6P1R3 559 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 TOMM5Q8N4H5 51 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ZBTB44Q8NCP5 570 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 OR10Q1Q8NGQ4 319 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ANKRD49Q8WVL7 239 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 COA1Q9GZY4 146 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 LHX5Q9H2C1 402 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 ZNF451Q9Y4E5 1061 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 PCDHGB2Q9Y5G2 931 aa10.06□□□□□ -0.8
CD28-202ENST00000374481 DNMT3AQ9Y6K1 912 aaPredicted RBP10.06□□□□□ -0.8
CD28-202ENST00000374481 MYH2Q9UKX2 1941 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 MYH4Q9Y623 1939 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 GNG14A0A1W2PPG7 69 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 C2orf74A8MZ97 194 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ADAMDEC1O15204 470 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TGM6O95932 706 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 ALDH2P05091 517 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 CRATP43155 626 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 HERVK_113P63132 956 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 C10orf62Q5T681 223 aaPredicted RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 PAMR1Q6UXH9 720 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 RPS27LQ71UM5 84 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 PAPD5Q8NDF8 572 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 RPL10LQ96L21 214 aaKnown RBP10.05□□□□□ -0.8
CD28-202ENST00000374481 SYT11Q9BT88 431 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 TBC1D17Q9HA65 648 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 MAN2B2Q9Y2E5 1009 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 PCDHGB3Q9Y5G1 929 aa10.05□□□□□ -0.8
CD28-202ENST00000374481 KRBOX1C9JBD0 128 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms