RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 TIFABQ6ZNK6 161 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 PACRGLQ8N7B6 248 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 SPERTQ8NA61 448 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 NEK7Q8TDX7 302 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 CRELD1Q96HD1 420 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 C12orf42Q96LP6 360 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 TTLL2Q9BWV7 592 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 MFSD1Q9H3U5 465 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 RC3H2Q9HBD1 1191 aaKnown RBP13.97□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF358Q9NW07 568 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 PCDHGC4Q9Y5F7 938 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF541Q9H0D2 1346 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 RBMXL2O75526 392 aaKnown RBP13.97□□□□□ -0.17
LMX1B-202ENST00000373474 GRIA1P42261 906 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 MAPK12P53778 367 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 NAE1Q13564 534 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 SNAPC1Q16533 368 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 SLC35G1Q2M3R5 365 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 IRAK1BP1Q5VVH5 260 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 SLC39A4Q6P5W5 647 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 CLEC20AQ6ZU45 233 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 GPR65Q8IYL9 337 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 TMEM199Q8N511 208 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 EBPLQ9BY08 206 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 PCDHAC1Q9H158 963 aa13.97□□□□□ -0.17
LMX1B-202ENST00000373474 INTS7Q9NVH2 962 aaKnown RBP13.97□□□□□ -0.17
LMX1B-202ENST00000373474 I3L521 148 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 hCG_2039718K7EN88 272 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 ERVK-8P63133 956 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 TMEM44Q2T9K0 475 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 MSS51Q4VC12 460 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 TMEM214Q6NUQ4 689 aaKnown RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 TMEM192Q8IY95 271 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 TNKS2Q9H2K2 1166 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 SOHLH2Q9NX45 425 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 TLR6Q9Y2C9 796 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 NR2E3Q9Y5X4 410 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 ARPC4-TTLL3A0A0A6YYG9 625 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 A0A0G2JLL6 359 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 KLRG2A4D1S0 409 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 BTBD19C9JJ37 291 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 NOBOXO60393 691 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 PEX10O60683 326 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 COL6A1P12109 1028 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 AMD1P17707 334 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 AZGP1P25311 298 aaKnown RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 MTPNP58546 118 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 CXorf57Q6NSI4 855 aaKnown RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 HMBOX1Q6NT76 420 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 KLHDC10Q6PID8 442 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 PRRT2Q7Z6L0 340 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF548Q8NEK5 533 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 LRRC3Q9BY71 257 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 RNF208Q9H0X6 261 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 ZNF639Q9UID6 485 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 FCF1Q9Y324 198 aaKnown RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 PRMT3O60678 531 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 CTNNB1P35222 781 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 SLC9A3P48764 834 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 OGDHQ02218 1023 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 CCDC28AQ8IWP9 274 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 INO80EQ8NBZ0 244 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-202ENST00000373474 KCTD13Q8WZ19 329 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 RNF31Q96EP0 1072 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 PPM1HQ9ULR3 514 aa13.96□□□□□ -0.17
LMX1B-202ENST00000373474 RFTN1Q14699 578 aaPredicted RBP13.96□□□□□ -0.18
LMX1B-202ENST00000373474 TEAD4Q15561 434 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 ATG10Q9H0Y0 220 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 CCDC177Q9NQR7 707 aaPredicted RBP13.96□□□□□ -0.18
LMX1B-202ENST00000373474 MAU2Q9Y6X3 613 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 COL1A1P02452 1464 aaPredicted RBP13.96□□□□□ -0.18
LMX1B-202ENST00000373474 HLA-DQB2P05538 268 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 RPS14P62263 151 aaKnown RBP13.96□□□□□ -0.18
LMX1B-202ENST00000373474 SP3Q02447 781 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 SRSF11Q05519 484 aaKnown RBP13.96□□□□□ -0.18
LMX1B-202ENST00000373474 CHIT1Q13231 466 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 C9orf64Q5T6V5 341 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 DNAJB7Q7Z6W7 309 aaPredicted RBP13.96□□□□□ -0.18
LMX1B-202ENST00000373474 OR52J3Q8NH60 311 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 POF1BQ8WVV4 589 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 CNPPD1Q9BV87 410 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 NMUR1Q9HB89 426 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 PCDHGB3Q9Y5G1 929 aa13.96□□□□□ -0.18
LMX1B-202ENST00000373474 OR6C70A6NIJ9 312 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 TBX1O43435 398 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 GNRH1P01148 92 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 PSKH1P11801 424 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 NRG3P56975 720 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 SYPL2Q5VXT5 272 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 NAT16Q8N8M0 369 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 CEP76Q8TAP6 659 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 C2orf15Q8WU43 125 aaKnown RBP13.95□□□□□ -0.18
LMX1B-202ENST00000373474 PIGKQ92643 395 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 UFD1Q92890 307 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 UPF1Q92900 1129 aaKnown RBP eCLIP13.95□□□□□ -0.18
LMX1B-202ENST00000373474 OR52B2Q96RD2 323 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 TOR3AQ9H497 397 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 CD84Q9UIB8 345 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 IFI30P13284 250 aa13.95□□□□□ -0.18
LMX1B-202ENST00000373474 RAPSNQ13702 412 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms