RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 RIPOR1Q6ZS17 1223 aa15.7■□□□□ 0.1
C9orf78-201ENST00000372447 NSUN5Q96P11 429 aaKnown RBP15.7■□□□□ 0.1
C9orf78-201ENST00000372447 PANX3Q96QZ0 392 aa15.7■□□□□ 0.1
C9orf78-201ENST00000372447 MID1IP1Q9NPA3 183 aa15.7■□□□□ 0.1
C9orf78-201ENST00000372447 RAD18Q9NS91 495 aa15.7■□□□□ 0.1
C9orf78-201ENST00000372447 NFKBIL1Q9UBC1 381 aaPredicted RBP15.7■□□□□ 0.1
C9orf78-201ENST00000372447 GNPTGQ9UJJ9 305 aa15.7■□□□□ 0.1
C9orf78-201ENST00000372447 TMCO1Q9UM00 188 aa15.7■□□□□ 0.1
C9orf78-201ENST00000372447 FRYLO94915 3013 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 A0A1W2PR77 199 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 FADS2P1A8MWK0 482 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 PPP6CO00743 305 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 UBDO15205 165 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CCNT2O60583 730 aaKnown RBP15.69■□□□□ 0.1
C9orf78-201ENST00000372447 KRT36O76013 467 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 EPN2O95208 641 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CD38P28907 300 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 TRIM23P36406 574 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CSNK1EP49674 416 aaKnown RBP15.69■□□□□ 0.1
C9orf78-201ENST00000372447 PFN3P60673 137 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 ACTR3P61158 418 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CLCQ05315 142 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CHRNA6Q15825 494 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 GPR33Q49SQ1 333 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 C1orf146Q5VVC0 180 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 ZDHHC20Q5W0Z9 365 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 ANKS6Q68DC2 871 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 LAIR1Q6GTX8 287 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 RAET1GQ6H3X3 334 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 PGM2L1Q6PCE3 622 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 ABI3BPQ7Z7G0 1075 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 GPSM1Q86YR5 675 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 TRPC4APQ8TEL6 797 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 C19orf60Q96EN9 201 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CCDC97Q96F63 343 aaPredicted RBP15.69■□□□□ 0.1
C9orf78-201ENST00000372447 PDLIM5Q96HC4 596 aaKnown RBP15.69■□□□□ 0.1
C9orf78-201ENST00000372447 BOCQ9BWV1 1114 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 SPATA16Q9BXB7 569 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 C1QTNF3Q9BXJ4 246 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 ARRDC1-AS1Q9H2J1 176 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 CRLS1Q9UJA2 301 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 OR1A2Q9Y585 309 aa15.69■□□□□ 0.1
C9orf78-201ENST00000372447 PLXNA2O75051 1894 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 KNL1Q8NG31 2342 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 NCF1BA6NI72 391 aaPredicted RBP15.68■□□□□ 0.1
C9orf78-201ENST00000372447 NCF1CA8MVU1 366 aaPredicted RBP15.68■□□□□ 0.1
C9orf78-201ENST00000372447 AIM2O14862 343 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 AZIN1O14977 448 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 RPS17P08708 135 aaKnown RBP15.68■□□□□ 0.1
C9orf78-201ENST00000372447 NCF1P14598 390 aaPredicted RBP15.68■□□□□ 0.1
C9orf78-201ENST00000372447 GNSP15586 552 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 UGT1A6P19224 532 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 UGT1A1P22309 533 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 UGT1A4P22310 534 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 UGT1A3P35503 534 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 UGT1A5P35504 534 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 GPR1P46091 355 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 NUDT2P50583 147 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 CCNG1P51959 295 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 TBL3Q12788 808 aaKnown RBP15.68■□□□□ 0.1
C9orf78-201ENST00000372447 LCP2Q13094 533 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 RCN1Q15293 331 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 PPP1R3AQ16821 1122 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 CYHR1Q6ZMK1 362 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 TRAM1L1Q8N609 369 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 KYQ8NBH2 561 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 OR13H1Q8NG92 308 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 ZSCAN5AQ9BUG6 496 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 C15orf41Q9Y2V0 281 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 DNAJC15Q9Y5T4 150 aa15.68■□□□□ 0.1
C9orf78-201ENST00000372447 TNRC6BQ9UPQ9 1833 aaKnown RBP15.68■□□□□ 0.1
C9orf78-201ENST00000372447 A0A1B0GTW7 788 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 SNX2O60749 519 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 GPC4O75487 556 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 HOXD12P35452 270 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 AFF3P51826 1226 aaKnown RBP15.67■□□□□ 0.1
C9orf78-201ENST00000372447 HK3P52790 923 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 SQLEQ14534 574 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 ATP13A5Q4VNC0 1218 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 KANK2Q63ZY3 851 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 C16orf89Q6UX73 402 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 Q6ZSR6 202 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 LARP4Q71RC2 724 aaKnown RBP eCLIP15.67■□□□□ 0.1
C9orf78-201ENST00000372447 MFSD2AQ8NA29 543 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 DTX3LQ8TDB6 740 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 APOOQ9BUR5 198 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 LGR4Q9BXB1 951 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 SUSD2Q9UGT4 822 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 CNOT6Q9ULM6 557 aaKnown RBP15.67■□□□□ 0.1
C9orf78-201ENST00000372447 PCDHGA5Q9Y5G8 931 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 PRSS21Q9Y6M0 314 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 SCN8AQ9UQD0 1980 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 WDR87Q6ZQQ6 2873 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 PATE3B3GLJ2 98 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 RETP07949 1114 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 THEGLP0DJG4 465 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 TEAD1P28347 426 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 MPLP40238 635 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 DPP6P42658 865 aa15.67■□□□□ 0.1
C9orf78-201ENST00000372447 AGTR2P50052 363 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms