RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 MBD1Q9UIS9 605 aaPredicted RBP12.56□□□□□ -0.4
GPC3-201ENST00000370818 PTBP2Q9UKA9 531 aaKnown RBP12.56□□□□□ -0.4
GPC3-201ENST00000370818 TMPRSS11EQ9UL52 423 aa12.56□□□□□ -0.4
GPC3-201ENST00000370818 ERVW-1Q9UQF0 538 aa12.56□□□□□ -0.4
GPC3-201ENST00000370818 OR7A17O14581 309 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 ACOT8O14734 319 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 MRASO14807 208 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TAPBPO15533 448 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 VPS4BO75351 444 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 SPINT3P49223 89 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 BNIP3Q12983 259 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 NR1D2Q14995 579 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 SCIMPQ6UWF3 145 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 GOLGA7Q7Z5G4 137 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 PLPP6Q8IY26 295 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 CDYL2Q8N8U2 506 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 ZNF557Q8N988 423 aaPredicted RBP12.55□□□□□ -0.4
GPC3-201ENST00000370818 PBXIP1Q96AQ6 731 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 EFHD2Q96C19 240 aaPredicted RBP12.55□□□□□ -0.4
GPC3-201ENST00000370818 ATAD3AQ9NVI7 634 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 BCAP29Q9UHQ4 241 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 OARD1Q9Y530 152 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TNPO3Q9Y5L0 923 aaKnown RBP12.55□□□□□ -0.4
GPC3-201ENST00000370818 GPR45Q9Y5Y3 372 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 ANKRD12Q6UB98 2062 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 IGLV3-16A0A075B6K0 115 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TRIM64BA6NI03 449 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TTC34A8MYJ7 566 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 C9JVG2 144 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 FAM47E-STBD1D6RA91 191 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 RAD51BO15315 384 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 GUCA1CO95843 209 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TCF3P15923 654 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TCN1P20061 433 aaPredicted RBP12.55□□□□□ -0.4
GPC3-201ENST00000370818 ANKRD26P1Q6NSI1 321 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 MIER2Q8N344 545 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 SLC15A4Q8N697 577 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 ITFG1Q8TB96 612 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 TRUB1Q8WWH5 349 aaKnown RBP12.55□□□□□ -0.4
GPC3-201ENST00000370818 OTUB2Q96DC9 234 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 SLC45A3Q96JT2 553 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 COPS8Q99627 209 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 FAM126AQ9BYI3 521 aaPredicted RBP12.55□□□□□ -0.4
GPC3-201ENST00000370818 CXorf21Q9HAI6 301 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 SLC52A3Q9NQ40 469 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 LATS2Q9NRM7 1088 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 RWDD3Q9Y3V2 267 aa12.55□□□□□ -0.4
GPC3-201ENST00000370818 A0A087WXM4 84 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 GIPC1O14908 333 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 LEFTY1O75610 366 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 BCAS2O75934 225 aaPredicted RBP12.54□□□□□ -0.4
GPC3-201ENST00000370818 MATN4O95460 622 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 SYN1P17600 705 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 CAPN3P20807 821 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 WEE1P30291 646 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 RCVRNP35243 200 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 GSSP48637 474 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 ATXN3P54252 364 aaPredicted RBP12.54□□□□□ -0.4
GPC3-201ENST00000370818 ITGADQ13349 1161 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 LAYNQ6UX15 382 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 HACD2Q6Y1H2 254 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 SLC29A1Q99808 456 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 SLC39A3Q9BRY0 314 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 MTG2Q9H4K7 406 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 ADA2Q9NZK5 511 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 MAP10Q9P2G4 905 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 CD84Q9UIB8 345 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 PRORSD1PA6NEY8 169 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 NR5A2O00482 541 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 TRIM38O00635 465 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 CHEK2O96017 543 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 CTSLP07711 333 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 POLR2EP19388 210 aaKnown RBP12.54□□□□□ -0.4
GPC3-201ENST00000370818 HSPA7P48741 367 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 POLR2LP62875 67 aaKnown RBP12.54□□□□□ -0.4
GPC3-201ENST00000370818 VPS26BQ4G0F5 336 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 IL23RQ5VWK5 629 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 BRAT1Q6PJG6 821 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 Q6ZSR9 355 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 EFL1Q7Z2Z2 1120 aaKnown RBP12.54□□□□□ -0.4
GPC3-201ENST00000370818 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
GPC3-201ENST00000370818 TAMM41Q96BW9 452 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 TEX37Q96LM6 180 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 CTRCQ99895 268 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 APOL5Q9BWW9 433 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 NDEL1Q9GZM8 345 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 SEMA6AQ9H2E6 1030 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 SPAG4Q9NPE6 437 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 SACM1LQ9NTJ5 587 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 FBXO10Q9UK96 956 aa12.54□□□□□ -0.4
GPC3-201ENST00000370818 A0A1W2PQ67 120 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 CAPN1P07384 714 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 CCR7P32248 378 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 GDF5P43026 501 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 ARPC4P59998 168 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 RALGDSQ12967 914 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 TRAF3Q13114 568 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 GTF2H2Q13888 395 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 DHCR24Q15392 516 aa12.53□□□□□ -0.4
GPC3-201ENST00000370818 GTF2H2CQ6P1K8 395 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms