RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PCNPQ8WW12 178 aaKnown RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 RHBDF1Q96CC6 855 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 MTFMTQ96DP5 389 aaKnown RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 FAM163AQ96GL9 167 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 RIOX1Q9H6W3 641 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SDHAF3Q9NRP4 125 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 PDP1Q9P0J1 537 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 MON2Q7Z3U7 1717 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 FAM220BPB1ANY3 271 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 M0R036 132 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 MITFO75030 526 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 REM1O75628 298 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 MTHFD1P11586 935 aaKnown RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 ADORA2AP29274 412 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 AXLP30530 894 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 FEN1P39748 380 aaKnown RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 AP3S2P59780 193 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 BLOC1S1P78537 153 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 PRKG2Q13237 762 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 UBAP2Q5T6F2 1119 aaKnown RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 GCNT7Q6ZNI0 430 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 MSANTD1Q6ZTZ1 278 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 CCDC117Q8IWD4 279 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 OR7G2Q8NG99 324 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 OR52K2Q8NGK3 314 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SLC2A11Q9BYW1 496 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 ARL6Q9H0F7 186 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 JPH1Q9HDC5 661 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 GRXCR2A6NFK2 248 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SPDYE2BA6NHP3 402 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 E5RJQ4 531 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SMIM22K7EJ46 135 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 IFNA10P01566 189 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 IFNA17P01571 189 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 RLN2P04090 185 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SPDYE6P0CI01 402 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 HGFP14210 728 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 GZMKP49863 264 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 ZNF667Q5HYK9 610 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 NAPEPLDQ6IQ20 393 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 LILRB2Q8N423 598 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 EEF1AKMT1Q8WVE0 214 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 TRIM54Q9BYV2 358 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 POLR3FQ9H1D9 316 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 GAREM1Q9H706 876 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 LRRC4Q9HBW1 653 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SLAMF7Q9NQ25 335 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 GGA3Q9NZ52 723 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 SAE1Q9UBE0 346 aaPredicted RBP10.24□□□□□ -0.77
PRDM1-201ENST00000369089 PCDHAC2Q9Y5I4 1007 aa10.24□□□□□ -0.77
PRDM1-201ENST00000369089 PITPNM1O00562 1244 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 PROM1O43490 865 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 SNAPINO95295 136 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 MYL3P08590 195 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 PRKAR2AP13861 404 aaKnown RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 LHCGRP22888 699 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 JAM2P57087 298 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 SNRPFP62306 86 aaKnown RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 KCNAB2Q13303 367 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 MBLAC2Q68D91 279 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 GTF2IRD2BQ6EKJ0 949 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 GTF2IRD2Q86UP8 949 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 KCNMB4Q86W47 210 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 RIT2Q99578 217 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 ASPNQ9BXN1 380 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 HDHD5Q9BXW7 423 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 SLC19A3Q9BZV2 496 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 PTGFRNQ9P2B2 879 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 RIC1Q4ADV7 1423 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 ARGFXA6NJG6 315 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 OR2AT4A6NND4 320 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 M0QYV0 167 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 HCN1O60741 890 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 UGT2B17O75795 530 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 GPD1P21695 349 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 HTR1BP28222 390 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 TWF1Q12792 350 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 TMEM132BQ14DG7 1078 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 LRRC26Q2I0M4 334 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 USP41Q3LFD5 358 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 CCNJQ5T5M9 372 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 GDPD3Q7L5L3 318 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 CMC1Q7Z7K0 106 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 OR6M1Q8NGM8 313 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 ZNF668Q96K58 619 aaPredicted RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 MXRA8Q9BRK3 442 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 GNG8Q9UK08 70 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 DHRS7Q9Y394 339 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 WASHC1A8K0Z3 465 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 HNRNPLP14866 589 aaKnown RBP eCLIP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 RPS12P25398 132 aaKnown RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 CAP2P40123 477 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 MRPS5P82675 430 aaKnown RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 TTLL4Q14679 1199 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 TSTQ16762 297 aaKnown RBP10.23□□□□□ -0.77
PRDM1-201ENST00000369089 PTCHD4Q6ZW05 846 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 FAM83AQ86UY5 434 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 Q8N402 240 aa10.23□□□□□ -0.77
PRDM1-201ENST00000369089 PLD5Q8N7P1 536 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms