RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 PKNOX1P55347 436 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 UGT3A2Q3SY77 523 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 SLC9B1Q4ZJI4 515 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 CLEC6AQ6EIG7 209 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 CADM4Q8NFZ8 388 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 OR52B6Q8NGF0 335 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 CCT6BQ92526 530 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 NUF2Q9BZD4 464 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 SLC32A1Q9H598 525 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 NOL11Q9H8H0 719 aaKnown RBP23.27■■□□□ 1.32
SNX3-203ENST00000368979 STOX2Q9P2F5 926 aaPredicted RBP23.27■■□□□ 1.32
SNX3-203ENST00000368979 APOBEC2Q9Y235 224 aaKnown RBP23.27■■□□□ 1.32
SNX3-203ENST00000368979 KCNK6Q9Y257 313 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 FIS1Q9Y3D6 152 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 PLEKHM1Q9Y4G2 1056 aa23.27■■□□□ 1.32
SNX3-203ENST00000368979 LRP4O75096 1905 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 ANKRD12Q6UB98 2062 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 METTL12A8MUP2 240 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 MYO1CO00159 1063 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 AZIN1O14977 448 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 AXIN1O15169 862 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 DIAPH2O60879 1101 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 PIK3CGP48736 1102 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 FOXA1P55317 472 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 PDCD2Q16342 344 aaPredicted RBP23.26■■□□□ 1.31
SNX3-203ENST00000368979 PTCHD3Q3KNS1 767 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 CAPRIN2Q6IMN6 1127 aaKnown RBP23.26■■□□□ 1.31
SNX3-203ENST00000368979 GPRIN3Q6ZVF9 776 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 ALYREFQ86V81 257 aaKnown RBP23.26■■□□□ 1.31
SNX3-203ENST00000368979 KLHDC8AQ8IYD2 350 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 SLC22A18ASQ8N1D0 253 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 ATL1Q8WXF7 558 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 LRRC37BQ96QE4 947 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 IPPKQ9H8X2 491 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 KLQ9UEF7 1012 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 PNMA8BQ9ULN7 279 aaPredicted RBP23.26■■□□□ 1.31
SNX3-203ENST00000368979 PSMD13Q9UNM6 376 aa23.26■■□□□ 1.31
SNX3-203ENST00000368979 VCANP13611 3396 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 TRPC5OSA6NMA1 111 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 PI15O43692 258 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 SLC35G4P0C7Q5 338 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 IMPA1P29218 277 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 INHBCP55103 352 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 BTKQ06187 659 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 TRAF3Q13114 568 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 FAM219BQ5XKK7 198 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 MTDHQ86UE4 582 aaKnown RBP23.25■■□□□ 1.31
SNX3-203ENST00000368979 FAM174AQ8TBP5 190 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 SNX19Q92543 992 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 TFGQ92734 400 aaPredicted RBP23.25■■□□□ 1.31
SNX3-203ENST00000368979 EDAQ92838 391 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 MAELQ96JY0 434 aaKnown RBP23.25■■□□□ 1.31
SNX3-203ENST00000368979 RILPQ96NA2 401 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 INVSQ9Y283 1065 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 ASF1AQ9Y294 204 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 ANGPTL3Q9Y5C1 460 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 ST14Q9Y5Y6 855 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 TRIOO75962 3097 aa23.25■■□□□ 1.31
SNX3-203ENST00000368979 IFRD1O00458 451 aaPredicted RBP23.24■■□□□ 1.31
SNX3-203ENST00000368979 HGSO14964 777 aaPredicted RBP23.24■■□□□ 1.31
SNX3-203ENST00000368979 OTCP00480 354 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 EPB42P16452 691 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 CLCNKAP51800 687 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 SRP54P61011 504 aaKnown RBP23.24■■□□□ 1.31
SNX3-203ENST00000368979 ALG11Q2TAA5 492 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 AGTRAPQ6RW13 159 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 MAGEC3Q8TD91 643 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 TSACCQ96A04 125 aaPredicted RBP23.24■■□□□ 1.31
SNX3-203ENST00000368979 SPACA7Q96KW9 195 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 KCNA7Q96RP8 456 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 MYLK2Q9H1R3 596 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 OSGEPL1Q9H4B0 414 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 MEAF6Q9HAF1 191 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 WDR37Q9Y2I8 494 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 DNAJC15Q9Y5T4 150 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 SLCO1B1Q9Y6L6 691 aa23.24■■□□□ 1.31
SNX3-203ENST00000368979 ATXN2Q99700 1313 aaKnown RBP23.24■■□□□ 1.31
SNX3-203ENST00000368979 SKAP2O75563 359 aaPredicted RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 WDR47O94967 919 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR4F21O95013 312 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 SLC16A8O95907 504 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 EPORP19235 508 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 CD27P26842 260 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 RPL10P27635 214 aaKnown RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 ERVPABLB-1P60509 514 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 LRP8Q14114 963 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 LETMD1Q6P1Q0 360 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 YTHDF3Q7Z739 585 aaKnown RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 DCUN1D3Q8IWE4 304 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR9A1PQ8NGU1 263 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 PYCR2Q96C36 320 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 ERP27Q96DN0 273 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 SLC6A18Q96N87 628 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 OR52B2Q96RD2 323 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 COL25A1Q9BXS0 654 aaPredicted RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 NUSAP1Q9BXS6 441 aaKnown RBP23.23■■□□□ 1.31
SNX3-203ENST00000368979 ATG10Q9H0Y0 220 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 SDHDO14521 159 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 GIPC1O14908 333 aa23.23■■□□□ 1.31
SNX3-203ENST00000368979 SCAMP1O15126 338 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms