RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 ARTNQ5T4W7 220 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 KDELC2Q7Z4H8 507 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CYP4Z1Q86W10 505 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CALHM3Q86XJ0 350 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 FBXO16Q8IX29 292 aaPredicted RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 SLC22A15Q8IZD6 547 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CELF2-AS1Q8N7Q2 184 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 OR10A6Q8NH74 314 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 TTC9Q92623 222 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 GTF2H4Q92759 462 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 RNF34Q969K3 372 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 FUBP1Q96AE4 644 aaKnown RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 TADA1Q96BN2 335 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 ZBTB18Q99592 522 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 PATJQ8NI35 1801 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 OR51F1A6NGY5 319 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CENPXA8MT69 81 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 FAM25AB3EWG3 89 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 FAM25CB3EWG5 89 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 FAM25GB3EWG6 89 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 MUSKO15146 869 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 MITFO75030 526 aaPredicted RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 FKTNO75072 461 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 RPP40O75818 363 aaKnown RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 PEX11BO96011 259 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 LCKP06239 509 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 TGFBR1P36897 503 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 PRIM2P49643 509 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 MRPS15P82914 257 aaKnown RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 NRG1Q02297 640 aaPredicted RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 ARHGAP1Q07960 439 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 RUNDC3AQ59EK9 446 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 TOR1AIP1Q5JTV8 583 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 SLC46A3Q7Z3Q1 461 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 VN1R5Q7Z5H4 357 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 SNX20Q7Z614 316 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 PEX5LQ8IYB4 626 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 SYTL1Q8IYJ3 562 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 RTL3Q8N8U3 475 aaKnown RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 EDEM1Q92611 657 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 TMCO6Q96DC7 493 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 PYURFQ96I23 114 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 DEPDC7Q96QD5 511 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 GDF15Q99988 308 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 NUAK2Q9H093 628 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 NXF3Q9H4D5 531 aaKnown RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 CRTAC1Q9NQ79 661 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 INVSQ9Y283 1065 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 MICAL3Q7RTP6 2002 aa10.31□□□□□ -0.76
LYSMD1-201ENST00000368908 MFN2O95140 757 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 RPLP0P05388 317 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 MMP2P08253 660 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 G6PDP11413 515 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 LIPAP38571 399 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 DAPP51397 102 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 RENBPP51606 427 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 STC1P52823 247 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 DGKQP52824 942 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 LIMK1P53667 647 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 STARD3Q14849 445 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 ARHGEF6Q15052 776 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 TSNQ15631 228 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 FBXO43Q4G163 708 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 CCDC58Q4VC31 144 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 SIRPB2Q5JXA9 342 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 ZCCHC8Q6NZY4 707 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 SCIMPQ6UWF3 145 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 C11orf74Q86VG3 221 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 HORMAD1Q86X24 394 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 GALNT12Q8IXK2 581 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 NKAPQ8N5F7 415 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 PAF1Q8N7H5 531 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 PNPLA1Q8N8W4 532 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 GLB1L3Q8NCI6 653 aaPredicted RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 ST6GAL2Q96JF0 529 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 TBATAQ96M53 351 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 ACOX2Q99424 681 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 THUMPD3Q9BV44 507 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 CLPBQ9H078 707 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 CATSPERZQ9NTU4 200 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 DDX28Q9NUL7 540 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 VNN3Q9NY84 501 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 TAS2R13Q9NYV9 303 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 LYVE1Q9Y5Y7 322 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 DNAJC25-GNG10A0A024R161 153 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 TRBV5-3A0A0A0MS03 114 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 LOC285095A0A1B0GVY8 99 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 M0R082 166 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 IRAK2O43187 625 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 RHOBTB1O94844 696 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 OR4F21O95013 312 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 SLC25A27O95847 323 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 ATXN1LP0C7T5 689 aaKnown RBP10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 FPR1P21462 350 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 GADD45AP24522 165 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 CCR1P32246 355 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 CD86P42081 329 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 ARHGDIAP52565 204 aa10.3□□□□□ -0.76
LYSMD1-201ENST00000368908 SOX4Q06945 474 aaPredicted RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms