RNA–Protein interactions for RNA: ENST00000368445.9

SHC1-202, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-202ENST00000368445 ZNF77Q15935 545 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 PDPRQ8NCN5 879 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 OR10A6Q8NH74 314 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 BPIFB1Q8TDL5 484 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 AURKBQ96GD4 344 aaPredicted RBP13.5□□□□□ -0.25
SHC1-202ENST00000368445 CEP44Q9C0F1 390 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 SARDHQ9UL12 918 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 CNOT6Q9ULM6 557 aaKnown RBP13.5□□□□□ -0.25
SHC1-202ENST00000368445 CROCCQ5TZA2 2017 aa13.5□□□□□ -0.25
SHC1-202ENST00000368445 ARHGAP10A1A4S6 786 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 SLC28A1O00337 649 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 WNT9AO14904 365 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 KCNH1O95259 989 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 CPSF4O95639 269 aaKnown RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 PDYNP01213 254 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 EMX2Q04743 252 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 GK3PQ14409 553 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 SF1Q15637 639 aaKnown RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 GLYATQ6IB77 296 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 ADCY4Q8NFM4 1077 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 NXPE3Q969Y0 559 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 DNAJC11Q9NVH1 559 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 DPP7Q9UHL4 492 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 SNX6Q9UNH7 406 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 C15orf38-AP3S2A0A0A6YYH1 394 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 CATP04040 527 aaKnown RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 S100A3P33764 101 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 IL1RL1Q01638 556 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 OGFOD2Q6N063 350 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 ARPINQ7Z6K5 226 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 SFTPA1Q8IWL2 248 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 OR10Q1Q8NGQ4 319 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 ARMC5Q96C12 935 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 C1orf109Q9NX04 203 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 TDRKHQ9Y2W6 561 aaKnown RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 IRAK3Q9Y616 596 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 H3BM21 787 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 LSM1O15116 133 aaKnown RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 SCAMP1O15126 338 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 DFNA5O60443 496 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 MATN4O95460 622 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 SLC7A1P30825 629 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 PSMD8P48556 350 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 PPP1R8Q12972 351 aaKnown RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 RCAN2Q14206 197 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 AASDHQ4L235 1098 aaPredicted RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 CHPFQ8IZ52 775 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 SNX19Q92543 992 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 ECHDC3Q96DC8 303 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 NR1H4Q96RI1 486 aaPredicted RBP13.49□□□□□ -0.25
SHC1-202ENST00000368445 CENPKQ9BS16 269 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 LIMD1Q9UGP4 676 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 INVSQ9Y283 1065 aa13.49□□□□□ -0.25
SHC1-202ENST00000368445 TRBV5-4A0A0C4DH59 114 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 PRRT4C9JH25 899 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 ATG13O75143 517 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 RSL1D1O76021 490 aaKnown RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 VARSP26640 1264 aaKnown RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 AOAHP28039 575 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 PDHA2P29803 388 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 GTF2H3Q13889 308 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 OGFRL1Q5TC84 451 aaPredicted RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 ZDHHC20Q5W0Z9 365 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 PARS2Q7L3T8 475 aaKnown RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 KIAA2013Q8IYS2 634 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 PHACTR4Q8IZ21 702 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 CBR4Q8N4T8 237 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 SLC13A3Q8WWT9 602 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 OR8D1Q8WZ84 308 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 KLK6Q92876 244 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 FAM162AQ96A26 154 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 TSC22D3Q99576 134 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 ZIM2Q9NZV7 527 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 RIMS3Q9UJD0 308 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 FADS2P1A8MWK0 482 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 RECQL5O94762 991 aaPredicted RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 C8GP07360 202 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 EBLN1P0CF75 366 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 ZNF30P17039 623 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 OXTRP30559 389 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 CHN2P52757 468 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 OR4D2P58180 307 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 TRAP1Q12931 704 aaKnown RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 MAD2L1Q13257 205 aaPredicted RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 DMC1Q14565 340 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 CCSMST1Q4G0I0 132 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 XKR7Q5GH72 579 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 MINDY1Q8N5J2 469 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 GLYATL1Q969I3 302 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 MCCC1Q96RQ3 725 aaPredicted RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 SLC29A1Q99808 456 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 CCT7Q99832 543 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 MYOCQ99972 504 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 TMPRSS11EQ9UL52 423 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 TMEM98Q9Y2Y6 226 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 CFAP20Q9Y6A4 193 aaKnown RBP13.48□□□□□ -0.25
SHC1-202ENST00000368445 GNG14A0A1W2PPG7 69 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 HEPACAM2A8MVW5 462 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 FXYD1O00168 92 aa13.48□□□□□ -0.25
SHC1-202ENST00000368445 IFRD1O00458 451 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms