RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 RANBP9Q96S59 729 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 RBSNQ9H1K0 784 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 XKR8Q9H6D3 395 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 ANKMY1Q9P2S6 941 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 GPN3Q9UHW5 284 aaPredicted RBP14.35□□□□□ -0.11
CTSD-202ENST00000367196 VPS4AQ9UN37 437 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 SRPK3Q9UPE1 567 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 ICKQ9UPZ9 632 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 PLAAQ9Y263 795 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 R3HDM2Q9Y2K5 976 aaKnown RBP14.35□□□□□ -0.11
CTSD-202ENST00000367196 TDRKHQ9Y2W6 561 aaKnown RBP14.35□□□□□ -0.11
CTSD-202ENST00000367196 NAV2Q8IVL1 2488 aa14.35□□□□□ -0.11
CTSD-202ENST00000367196 SEC16AO15027 2179 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 RP1L1Q8IWN7 2480 aaPredicted RBP14.34□□□□□ -0.11
CTSD-202ENST00000367196 A0A0J9YY10 115 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 TTLL8A6PVC2 850 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 K7EM74 188 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 KLHL41O60662 606 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 DPM1O60762 260 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 OR2B3O76000 313 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 SUN1O94901 812 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 IFNB1P01574 187 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 IGHEP01854 428 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 CHRM5P08912 532 aaPredicted RBP14.34□□□□□ -0.11
CTSD-202ENST00000367196 UGT2B7P16662 529 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 ADRA1DP25100 572 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 VARSP26640 1264 aaKnown RBP14.34□□□□□ -0.11
CTSD-202ENST00000367196 ACADLP28330 430 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 CDC25BP30305 580 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 PTGIRP43119 386 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 CCL11P51671 97 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 FASTKD1Q53R41 847 aaKnown RBP14.34□□□□□ -0.11
CTSD-202ENST00000367196 DNAJC21Q5F1R6 531 aaKnown RBP14.34□□□□□ -0.11
CTSD-202ENST00000367196 PRAMEF17Q5VTA0 474 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 UNC5AQ6ZN44 842 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 CDHR3Q6ZTQ4 885 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 TMEM139Q8IV31 216 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 CCDC89Q8N998 374 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 PPHLN1Q8NEY8 458 aaKnown RBP14.34□□□□□ -0.11
CTSD-202ENST00000367196 DENND1AQ8TEH3 1009 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 SGSM3Q96HU1 749 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 DESI2Q9BSY9 194 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 MLXIPLQ9NP71 852 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 IRAK4Q9NWZ3 460 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 ANAPC5Q9UJX4 755 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 ZNF148Q9UQR1 794 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 RELNP78509 3460 aa14.34□□□□□ -0.11
CTSD-202ENST00000367196 SLC5A10A0PJK1 596 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 CCDC162PA2VCL2 907 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 AP3B1O00203 1094 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 LIASO43766 372 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 KRT86O43790 486 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 GOT2P00505 430 aaKnown RBP14.33□□□□□ -0.12
CTSD-202ENST00000367196 PVRP15151 417 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 MLLT10P55197 1068 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 CHAF1BQ13112 559 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 KIR2DS3Q14952 304 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 BRD3Q15059 726 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 TMED2Q15363 201 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 SLC5A12Q1EHB4 618 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 PTCHD3Q3KNS1 767 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 CCDC38Q502W7 563 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 TSTD2Q5T7W7 516 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 TLDC1Q6P9B6 456 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 TAB3Q8N5C8 712 aaPredicted RBP14.33□□□□□ -0.12
CTSD-202ENST00000367196 OR13J1Q8NGT2 312 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 OR6P1Q8NGX9 317 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 OR4L1Q8NH43 312 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 CPT1CQ8TCG5 803 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 ASZ1Q8WWH4 475 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 ATG4AQ8WYN0 398 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 HDAC10Q969S8 669 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 SLC22A18Q96BI1 424 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 KLHL25Q9H0H3 589 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 ETNK1Q9HBU6 452 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 TXLNGQ9NUQ3 528 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 PAK5Q9P286 719 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 NDOR1Q9UHB4 597 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 MRFAP1Q9Y605 127 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 PRSS21Q9Y6M0 314 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
CTSD-202ENST00000367196 SPENQ96T58 3664 aaKnown RBP14.32□□□□□ -0.12
CTSD-202ENST00000367196 TCRBV7S2A1N4TA0A589 114 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 OR51F1A6NGY5 319 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 ISM1B1AKI9 464 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 ZSCAN9O15535 394 aaPredicted RBP14.32□□□□□ -0.12
CTSD-202ENST00000367196 CEACAM4O75871 244 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 PDGFAP04085 211 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 APOA4P06727 396 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 TTPAP49638 278 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 RAB28P51157 221 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 OASLQ15646 514 aaKnown RBP14.32□□□□□ -0.12
CTSD-202ENST00000367196 RHBDD2Q6NTF9 364 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 SLC22A15Q8IZD6 547 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 GALNT11Q8NCW6 608 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 GSDMBQ8TAX9 411 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 FER1L6-AS2Q96M78 137 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 OR2A14Q96R47 310 aa14.32□□□□□ -0.12
CTSD-202ENST00000367196 RAB11FIP5Q9BXF6 653 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms