RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 ZNF280BQ86YH2 543 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 TMIEQ8NEW7 156 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CANT1Q8WVQ1 401 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 OR52E6Q96RD3 313 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 FUNDC2Q9BWH2 189 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 RBCK1Q9BYM8 510 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CCDC86Q9H6F5 360 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 FBXL3Q9UKT7 428 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SPO11Q9Y5K1 396 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CEPT1Q9Y6K0 416 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SOCS2O14508 198 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 OR1I1O60431 355 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 LTA4HP09960 611 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 RPL22P35268 128 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 NUDT6P53370 316 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CDH12P55289 794 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SMIM11AP58511 58 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 TMEM109Q9BVC6 243 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF471Q9BX82 626 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SSU72Q9NP77 194 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 GMEB2Q9UKD1 530 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 TRIP12Q14669 1992 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 ALPK2Q86TB3 2170 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 IL17AQ16552 155 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 UBE2R2Q712K3 238 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 FCGR1BQ92637 280 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 AASSQ9UDR5 926 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 KCNN3Q9UGI6 736 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 IGSF1Q8N6C5 1336 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CCDC85CA6NKD9 419 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 M6PRP20645 277 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PLEKHG4Q58EX7 1191 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 ANKRD54Q6NXT1 300 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZNF730Q6ZMV8 503 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 TMED9Q9BVK6 235 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SPATA5L1Q9BVQ7 753 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 BRINP2Q9C0B6 783 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PDGFDQ9GZP0 370 aaPredicted RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 NPEPPSL1A6NEC2 478 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PGAM2P15259 253 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PLA2G16P53816 162 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 POLR2LP62875 67 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 IRF8Q02556 426 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 FADDQ13158 208 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 OSMRQ99650 979 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 LHPPQ9H008 270 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 RGCCQ9H4X1 137 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 WASH6PQ9NQA3 447 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 C5orf51A6NDU8 294 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 AZIN1O14977 448 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 AKAP8O43823 692 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 ALDH2P05091 517 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 HNF1BP35680 557 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 OR10T2Q8NGX3 314 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 BRSK1Q8TDC3 778 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SAMD4AQ9UPU9 718 aaKnown RBP10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PCDHGB6Q9Y5F9 930 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 HOXA2O43364 376 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CSN2P05814 226 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CETPP11597 493 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SLC6A2P23975 617 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 CAV3P56539 151 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 MTPNP58546 118 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PRKCZQ05513 592 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 SETD4Q9NVD3 440 aa10.89□□□□□ -0.67
CDC42BPA-205ENST00000366769 PRSS44E7EML9 344 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ATE1O95260 518 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 GM2AP17900 193 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CASP3P42574 277 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SNTA1Q13424 505 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 MROH2AA6NES4 1674 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TAL1P17542 331 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SPAM1P38567 509 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SOX10P56693 466 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CLCQ05315 142 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SLC30A6Q6NXT4 461 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TOMM5Q8N4H5 51 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CPSF7Q8N684 471 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 OVOS2A0A0J9YW53 1432 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 OVOS2Q6IE36 1432 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TISP43B9A030 160 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 SAGP10523 405 aaPredicted RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 NCS1P62166 190 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 TCTEX1D2Q8WW35 142 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 AHCTF1Q8WYP5 2266 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 LYARQ9NX58 379 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 INTS1Q8N201 2190 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 BBIP1A8MTZ0 92 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CBR1P16152 277 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ASMTP46597 345 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 CBLBQ13191 982 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 PIWIL4Q7Z3Z4 852 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 FIBCD1Q8N539 461 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 USP29Q9HBJ7 922 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 ZMAT5Q9UDW3 170 aaKnown RBP10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 RASAL1O95294 804 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 IL1BP01584 269 aa10.88□□□□□ -0.67
CDC42BPA-205ENST00000366769 YBX3P16989 372 aaKnown RBP eCLIP10.88□□□□□ -0.671e-6■■□□□ 12.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms