RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ARSIQ5FYB1 569 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 RABL3Q5HYI8 236 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 SPRED1Q7Z699 444 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 ERI1Q8IV48 349 aaKnown RBP22.11■■□□□ 1.13
LDB1-201ENST00000361198 PLPP6Q8IY26 295 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 EZH1Q92800 747 aaPredicted RBP22.11■■□□□ 1.13
LDB1-201ENST00000361198 FARSBQ9NSD9 589 aaKnown RBP22.11■■□□□ 1.13
LDB1-201ENST00000361198 PKD2L2Q9NZM6 624 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 KLHL42Q9P2K6 505 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 C5orf42Q9H799 3197 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 FCGR1AP12314 374 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 HOXA9P31269 272 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 GSK3BP49841 420 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 PLOD1Q02809 727 aaPredicted RBP22.11■■□□□ 1.13
LDB1-201ENST00000361198 PRKG2Q13237 762 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 HSD11B1LQ7Z5J1 315 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 ZFAND4Q86XD8 727 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 PAPD5Q8NDF8 572 aaKnown RBP22.11■■□□□ 1.13
LDB1-201ENST00000361198 NUDT8Q8WV74 236 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 ADI1Q9BV57 179 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 ALG2Q9H553 416 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 TMEM45AQ9NWC5 275 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 PDE10AQ9Y233 779 aa22.11■■□□□ 1.13
LDB1-201ENST00000361198 TCRBV5S2A0A599 114 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 LOC730098B7Z3J9 87 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 ACOX3O15254 700 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 STK16O75716 305 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 ANXA5P08758 320 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 CDK4P11802 303 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 ATP1B2P14415 290 aaPredicted RBP22.1■■□□□ 1.13
LDB1-201ENST00000361198 EPB42P16452 691 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 CEBPBP17676 345 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 MERTKQ12866 999 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 AAK1Q2M2I8 961 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 SLC36A3Q495N2 470 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 CYP20A1Q6UW02 462 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 SERPINA13PQ6UXR4 307 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 VRK3Q8IV63 474 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 KIAA2013Q8IYS2 634 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 CHCHD4Q8N4Q1 142 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 LRRC3BQ96PB8 259 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 NTMT1Q9BV86 223 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 ARL15Q9NXU5 204 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 MARK1Q9P0L2 795 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 POLR3HQ9Y535 204 aaPredicted RBP22.1■■□□□ 1.13
LDB1-201ENST00000361198 LINC01553A4QN01 128 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 FAM149AA5PLN7 773 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 PER2O15055 1255 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 XYLBO75191 536 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 RASAL1O95294 804 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 CTSLP07711 333 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 GNAO1P09471 354 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 ZNF30P17039 623 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 AKT1P31749 480 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 Q6ZVL8 140 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 LEMD2Q8NC56 503 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 INTS7Q9NVH2 962 aaKnown RBP22.1■■□□□ 1.13
LDB1-201ENST00000361198 KLQ9UEF7 1012 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 PRKAG2Q9UGJ0 569 aa22.1■■□□□ 1.13
LDB1-201ENST00000361198 ANKRD28O15084 1053 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 RSL1D1O76021 490 aaKnown RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 MSH3P20585 1137 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 VIPR1P32241 457 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 GBX1Q14549 363 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 FXNQ16595 210 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 ZXDCQ2QGD7 858 aaPredicted RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 TMTC4Q5T4D3 741 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 METTL2BQ6P1Q9 378 aaKnown RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 SLC2A7Q6PXP3 512 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 UBE2R2Q712K3 238 aaPredicted RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 B4GALNT2Q8NHY0 566 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 SKA2Q8WVK7 121 aaPredicted RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 OTUB2Q96DC9 234 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 FAM83DQ9H4H8 585 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 PCDH12Q9NPG4 1184 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 A0A087WXM4 84 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 SOBPA7XYQ1 873 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 ARHGEF15O94989 841 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 EBLN1P0CF75 366 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 UMPSP11172 480 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 CYP2A6P11509 494 aaPredicted RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 SYN1P17600 705 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 ETV3P41162 512 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 EEFSECP57772 596 aaKnown RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 BOP1Q14137 746 aaKnown RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 CYP51A1Q16850 503 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 LRRC23Q53EV4 343 aaPredicted RBP22.09■■□□□ 1.13
LDB1-201ENST00000361198 ZNF366Q8N895 744 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 TNIP2Q8NFZ5 429 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 TMEM74Q96NL1 305 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 CD320Q9NPF0 282 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 OAZ3Q9UMX2 235 aa22.09■■□□□ 1.13
LDB1-201ENST00000361198 KANSL1LA0AUZ9 987 aa22.08■■□□□ 1.13
LDB1-201ENST00000361198 DYTNA2CJ06 578 aa22.08■■□□□ 1.13
LDB1-201ENST00000361198 EIF3FO00303 357 aaPredicted RBP22.08■■□□□ 1.13
LDB1-201ENST00000361198 ULK1O75385 1050 aa22.08■■□□□ 1.13
LDB1-201ENST00000361198 NPPAP01160 153 aa22.08■■□□□ 1.13
LDB1-201ENST00000361198 HNRNPA1P09651 372 aaKnown RBP eCLIP22.08■■□□□ 1.13
LDB1-201ENST00000361198 SLC2A4P14672 509 aa22.08■■□□□ 1.13
LDB1-201ENST00000361198 TIMP2P16035 220 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms