RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 MUS81Q96NY9 551 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 QKIQ96PU8 341 aaKnown RBP eCLIP7.58□□□□□ -1.2
CCL28-201ENST00000361115 OMDQ99983 421 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 TRIM8Q9BZR9 551 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 WDR12Q9GZL7 423 aaKnown RBP7.58□□□□□ -1.2
CCL28-201ENST00000361115 SGK2Q9HBY8 427 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 WARS2Q9UGM6 360 aaKnown RBP7.58□□□□□ -1.2
CCL28-201ENST00000361115 LSM7Q9UK45 103 aaKnown RBP7.58□□□□□ -1.2
CCL28-201ENST00000361115 FBXO10Q9UK96 956 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 MAGED2Q9UNF1 606 aaPredicted RBP7.58□□□□□ -1.2
CCL28-201ENST00000361115 RAI2Q9Y5P3 530 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SLCO1B7G3V0H7 640 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 M0QYV0 167 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SNRPB2P08579 225 aaKnown RBP7.58□□□□□ -1.2
CCL28-201ENST00000361115 HLA-EP13747 358 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 CXCR2P25025 360 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 S100A5P33763 92 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 HK2P52789 917 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 ATP6V0D1P61421 351 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SLC13A2Q13183 592 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 TUBA3CQ13748 450 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 STARD3Q14849 445 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 ZNF699Q32M78 642 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 PAGE2BQ5JRK9 111 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 TSTD2Q5T7W7 516 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 OR6B2Q6IFH4 312 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 UGT3A1Q6NUS8 523 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 C4orf22Q6V702 233 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 FAM183BPQ6ZVS7 135 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 RPS27LQ71UM5 84 aaKnown RBP7.58□□□□□ -1.2
CCL28-201ENST00000361115 SLCO6A1Q86UG4 719 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 RETREG3Q86VR2 466 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SFRP1Q8N474 314 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SPATA6LQ8N4H0 392 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 ANKRD52Q8NB46 1076 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 CALML6Q8TD86 181 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 PIGKQ92643 395 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SH3KBP1Q96B97 665 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 HHIPQ96QV1 700 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 LGMNQ99538 433 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 DGCR6LQ9BY27 220 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 RNF38Q9H0F5 515 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 XYLT2Q9H1B5 865 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 FBXO44Q9H4M3 255 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 RMND5AQ9H871 391 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 DPP3Q9NY33 737 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 GTSE1Q9NYZ3 720 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 SLC39A10Q9ULF5 831 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 DNAH12Q6ZR08 3092 aa7.58□□□□□ -1.2
CCL28-201ENST00000361115 MUC22E2RYF6 1773 aaPredicted RBP7.57□□□□□ -1.2
CCL28-201ENST00000361115 IGHV1OR15-9A0A0B4J2B8 117 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 CCDC78A2IDD5 438 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 RGS13O14921 159 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 NUAK1O60285 661 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 NRP2O60462 931 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 USP12O75317 370 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 KAT7O95251 611 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 MT-CO1P00395 513 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 POLBP06746 335 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 HTR1AP08908 422 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 IL7RP16871 459 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 PSMB4P28070 264 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 CD6P30203 668 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 MAPK8P45983 427 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 ARPP19P56211 112 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 HSD17B7P56937 341 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 FAM45BPQ6NSW5 357 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 PMF1Q6P1K2 205 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 KIAA0408Q6ZU52 694 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 HTR3DQ70Z44 454 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 AKAP14Q86UN6 197 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 IQCHQ86VS3 1027 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 SPARTQ8N0X7 666 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 OR7G1Q8NGA0 311 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 SVIPQ8NHG7 77 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 FAM45AQ8TCE6 357 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 PNPT1Q8TCS8 783 aaKnown RBP7.57□□□□□ -1.2
CCL28-201ENST00000361115 HTRA1Q92743 480 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 TP53INP1Q96A56 240 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 ZUFSPQ96AP4 578 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 CHFRQ96EP1 664 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 TBATAQ96M53 351 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 SEPT5Q99719 369 aaPredicted RBP7.57□□□□□ -1.2
CCL28-201ENST00000361115 YTHDF1Q9BYJ9 559 aaKnown RBP7.57□□□□□ -1.2
CCL28-201ENST00000361115 OSBPL2Q9H1P3 480 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 SNX25Q9H3E2 840 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCL28-201ENST00000361115 ZNF229Q9UJW7 825 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 KLK13Q9UKR3 277 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 RUVBL2Q9Y230 463 aaKnown RBP7.57□□□□□ -1.2
CCL28-201ENST00000361115 PCDHGA11Q9Y5H2 935 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 PMF1-BGLAPU3KQ54 211 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 SPAG17Q6Q759 2223 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 ILVBLA1L0T0 632 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 LACTBL1A8MY62 500 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 TARM1B6A8C7 271 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 CYP17A1P05093 508 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 FBXO45P0C2W1 286 aa7.57□□□□□ -1.2
CCL28-201ENST00000361115 MTHFD1P11586 935 aaKnown RBP7.57□□□□□ -1.2
CCL28-201ENST00000361115 BTF3P20290 206 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms