RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 MID1IP1Q9NPA3 183 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 ARL15Q9NXU5 204 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 GULP1Q9UBP9 304 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 ZDHHC2Q9UIJ5 367 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 DMTF1Q9Y222 760 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 APOBEC2Q9Y235 224 aaKnown RBP13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 SLC17A4Q9Y2C5 497 aa13.52□□□□□ -0.25
PDLIM5-203ENST00000359265 TP53BP1Q12888 1972 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 CCDC163A0A0D9SF12 145 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 TRPC5OSA6NMA1 111 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 C10orf142B7Z368 130 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 K7ESF4 209 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 MATN2O00339 956 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 E2F3O00716 465 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 TOR1BO14657 336 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 LAMTOR5O43504 91 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 KCNJ13O60928 360 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 PIK3CGP48736 1102 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 HSPA7P48741 367 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 HNMTP50135 292 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 SHC2P98077 582 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 ABRQ12979 859 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 NFE2L1Q14494 772 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 NFATC4Q14934 902 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 RBBP7Q16576 425 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 SLC36A4Q6YBV0 504 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 CCDC121Q6ZUS5 278 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 RPS27LQ71UM5 84 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 GALNT13Q8IUC8 556 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 CFAP61Q8NHU2 1237 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 TRPC4APQ8TEL6 797 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 AGAP11Q8TF27 550 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 RILPQ96NA2 401 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 NSUN5Q96P11 429 aaKnown RBP13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 TMEM79Q9BSE2 394 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 TIMM29Q9BSF4 260 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 HGH1Q9BTY7 390 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 C6orf106Q9H6K1 298 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 SEMA4BQ9NPR2 832 aaPredicted RBP13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 ABCF3Q9NUQ8 709 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 OPTCQ9UBM4 332 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 ZNHIT2Q9UHR6 403 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 PRKAB1Q9Y478 270 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 ANGPTL3Q9Y5C1 460 aa13.51□□□□□ -0.25
PDLIM5-203ENST00000359265 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 ARHGEF33A8MVX0 844 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 C1QTNF9BB2RNN3 333 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PRAMEF26H0Y7S4 382 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 ZNF195O14628 629 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 TAPBPO15533 448 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 CCNT2O60583 730 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 DIAPH2O60879 1101 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 CRCPO75575 148 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 FSBPO95073 299 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 CEACAM5P06731 702 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 C1QTNF9P0C862 333 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 TSPAN8P19075 237 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 HTR1BP28222 390 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PDHA2P29803 388 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 BDKRB1P46663 353 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PKNOX1P55347 436 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 CLDN2P57739 230 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PFN3P60673 137 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 YPEL5P62699 121 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 DMPKQ09013 629 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 SPEM2Q0P670 501 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 GTF2H2Q13888 395 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 FBXO48Q5FWF7 155 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 GTF2H2CQ6P1K8 395 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 UNC5DQ6UXZ4 953 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 MBOAT1Q6ZNC8 495 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 GPRIN3Q6ZVF9 776 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 LRRC70Q7Z2Q7 622 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 EFL1Q7Z2Z2 1120 aaKnown RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 MAVSQ7Z434 540 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PDZD3Q86UT5 571 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 GBP7Q8N8V2 638 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 FBXO15Q8NCQ5 510 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 ATL1Q8WXF7 558 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 SKA1Q96BD8 255 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 FBXL8Q96CD0 374 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 WDR92Q96MX6 357 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 ZNF382Q96SR6 550 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 GPR174Q9BXC1 333 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 CD244Q9BZW8 370 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PRMT8Q9NR22 394 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 HEY2Q9UBP5 337 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 MOSPD1Q9UJG1 213 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 FIS1Q9Y3D6 152 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PCYT1BQ9Y5K3 369 aaPredicted RBP13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 HS3ST3A1Q9Y663 406 aa13.5□□□□□ -0.25
PDLIM5-203ENST00000359265 PRSS38A1L453 326 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 POM121BA6NF01 834 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CYSRT1A8MQ03 144 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 K7EPI3 171 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 UBFD1O14562 309 aaKnown RBP13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 CCDC22O60826 627 aa13.49□□□□□ -0.25
PDLIM5-203ENST00000359265 IGHV4-34P06331 123 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms