RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 CDK15Q96Q40 435 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 LPIN3Q9BQK8 851 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ARHGEF4Q9NR80 690 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 INTS10Q9NVR2 710 aaKnown RBP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 TAS2R7Q9NYW3 318 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF639Q9UID6 485 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 DAPL1A0PJW8 107 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 FABP12A6NFH5 140 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 PSKH1P11801 424 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 HEPACAMQ14CZ8 416 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 KXD1Q9BQD3 176 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 A0A1B0GVM2 712 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 C5orf51A6NDU8 294 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 TCAF2A6NFQ2 919 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 USP43Q70EL4 1123 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 OR2AG1Q9H205 316 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 COMMD3Q9UBI1 195 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ZSCAN5BA6NJL1 495 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 DNAJA2O60884 412 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 PRKCGP05129 697 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 GPIP06744 558 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 DGKGP49619 791 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 AQP4P55087 323 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF234Q14588 700 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 FAM174BQ3ZCQ3 159 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 AMZ1Q400G9 498 aa18.07■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF548Q8NEK5 533 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 FARSBQ9NSD9 589 aaKnown RBP18.07■□□□□ 0.48
SHANK1-202ENST00000359082 OR1I1O60431 355 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 ADAM8P78325 824 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 SCARB2Q14108 478 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 TOR1AIP1Q5JTV8 583 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 ATAT1Q5SQI0 421 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 NAPRTQ6XQN6 538 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 SGCDQ92629 289 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 RIMKLBQ9ULI2 386 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 PEX16Q9Y5Y5 336 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 C1QTNF8P60827 252 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 C1orf127Q8N9H9 656 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 SLC39A3Q9BRY0 314 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 ABCB8Q9NUT2 735 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 HEBP2Q9Y5Z4 205 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 A0A0G2JN53 185 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 A8MUA0 341 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 ITGB1P05556 798 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 PTPN2P17706 415 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 SLC1A2P43004 574 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 CHADLQ6NUI6 762 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 SNX27Q96L92 541 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 PEX10O60683 326 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 PGLSO95336 258 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 MAGEH1Q9H213 219 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 PCDHGC3Q9UN70 934 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 TLX3O43711 291 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-202ENST00000359082 LINGO3P0C6S8 592 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 HNRNPH3P31942 346 aaKnown RBP18.06■□□□□ 0.48
SHANK1-202ENST00000359082 HTR7P34969 479 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF366Q8N895 744 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 SIPA1Q96FS4 1042 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 ZSWIM3Q96MP5 696 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 COQ10BQ9H8M1 238 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 C1orf109Q9NX04 203 aa18.06■□□□□ 0.48
SHANK1-202ENST00000359082 RASGEF1AQ8N9B8 481 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 CD99L2Q8TCZ2 262 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 KCNC2Q96PR1 638 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 TRMT61BQ9BVS5 477 aaKnown RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 CPNE3O75131 537 aaKnown RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 CYP3A5P20815 502 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 VARSP26640 1264 aaKnown RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 CLCN4P51793 760 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 GPR153Q6NV75 609 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 RNF225M0QZC1 329 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 PPP1R11O60927 126 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 LMO2P25791 158 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 RORCP51449 518 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 RPS14P62263 151 aaKnown RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 PCBP2Q15366 365 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 KIAA1161Q6NSJ0 714 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 FITM2Q8N6M3 262 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 B3GALT6Q96L58 329 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF282Q9UDV7 671 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 TTC24A2A3L6 582 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 ZNF99A8MXY4 864 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 ZMYND11Q15326 602 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 NUS1Q96E22 293 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 MTERF1Q99551 399 aaKnown RBP18.05■□□□□ 0.48
SHANK1-202ENST00000359082 IL12RB2Q99665 862 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 PCBD2Q9H0N5 130 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 RIPK3Q9Y572 518 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 PRPS2P11908 318 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 CSKP41240 450 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 PNLIPRP1P54315 467 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 ACBD6Q9BR61 282 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 UCKL1Q9NWZ5 548 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 CACNG4Q9UBN1 327 aa18.05■□□□□ 0.48
SHANK1-202ENST00000359082 NPHS1O60500 1241 aa18.04■□□□□ 0.48
SHANK1-202ENST00000359082 SCGB1D2O95969 90 aa18.04■□□□□ 0.48
SHANK1-202ENST00000359082 ARCN1P48444 511 aaKnown RBP18.04■□□□□ 0.48
SHANK1-202ENST00000359082 YBEYP58557 167 aaPredicted RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms