RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 AP3S1Q92572 193 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 APOLD1Q96LR9 279 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PTGES2Q9H7Z7 377 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 EIF2B4Q9UI10 523 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PCDHA3Q9Y5H8 950 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GPATCH8Q9UKJ3 1502 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 OR6C6A6NF89 314 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 E7ENX8 843 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 FOXP2O15409 715 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SLC2A5P22732 501 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PTAFRP25105 342 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 DPP4P27487 766 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TAP2Q03519 686 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TAF10Q12962 218 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PARP6Q2NL67 630 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM214Q6NUQ4 689 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 DCLRE1AQ6PJP8 1040 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GALNT10Q86SR1 603 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 KREMEN2Q8NCW0 462 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PIGXQ8TBF5 258 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CASTOR1Q8WTX7 329 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CIDECQ96AQ7 238 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CDRT15Q96T59 188 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CMKLR1Q99788 373 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SAP130Q9H0E3 1048 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 NKX2-4Q9H2Z4 354 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TTYH1Q9H313 450 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 EHD1Q9H4M9 534 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GPRC5BQ9NZH0 403 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 ICKQ9UPZ9 632 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PADI2Q9Y2J8 665 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SPATA31A6Q5VVP1 1343 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TMEM2Q9UHN6 1383 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SLCO1B7G3V0H7 640 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 IFNA21P01568 189 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 LPOP22079 712 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 PAX6P26367 422 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TNFSF9P41273 254 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GRIA3P42263 894 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 RRP1BQ14684 758 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 FAM76BQ5HYJ3 339 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 LCN1P1Q5VSP4 162 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SLX4IPQ5VYV7 408 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 LRRC66Q68CR7 880 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 CCNJLQ8IV13 435 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 ZBTB2Q8N680 514 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 MFSD2AQ8NA29 543 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GOLM1Q8NBJ4 401 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 ZNF398Q8TD17 642 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TM9SF4Q92544 642 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TIFAQ96CG3 184 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 MAGEB18Q96M61 343 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 TEFMQ96QE5 360 aaKnown RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GPR174Q9BXC1 333 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 SLC6A16Q9GZN6 736 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 WDR26Q9H7D7 661 aa5.71□□□□□ -1.5
BRCA1-203ENST00000357654 NLE1Q9NVX2 485 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.71□□□□□ -1.5
BRCA1-203ENST00000357654 DUOX2Q9NRD8 1548 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 A0A1B0GTH6 734 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 CDK2AP1O14519 115 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 GLSO94925 669 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 TRUB2O95900 331 aaKnown RBP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 CLPTM1O96005 669 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 EPHA1P21709 976 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 F2RP25116 425 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 GGT2P36268 569 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 SLC6A3Q01959 620 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 GCNT6Q5T4J0 391 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 GARNL3Q5VVW2 1013 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 CDHR3Q6ZTQ4 885 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 PDSS2Q86YH6 399 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 MINDY2Q8NBR6 621 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 TRPV1Q8NER1 839 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 OR14L1PQ8NHC6 308 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 GATAD2BQ8WXI9 593 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 CLP1Q92989 425 aaKnown RBP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 RCN3Q96D15 328 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 ZFP3Q96NJ6 502 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 EBNA1BP2Q99848 306 aaKnown RBP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 OR8D2Q9GZM6 311 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 CDT1Q9H211 546 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 SERTAD4Q9NUC0 356 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 PLXNC1O60486 1568 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 EIF3HO15372 352 aaKnown RBP eCLIP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 MFSD11O43934 449 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 KDM4BO94953 1096 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 HEXAP06865 529 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 C8orf89P0DMQ9 161 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 HOXB9P17482 250 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 GLP1RP43220 463 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 DGKQP52824 942 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 ITPK1Q13572 414 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 C12orf40Q86WS4 652 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 RBFAQ8N0V3 343 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 NKAPQ8N5F7 415 aaKnown RBP5.7□□□□□ -1.5
BRCA1-203ENST00000357654 POGLUT1Q8NBL1 392 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 ATAD1Q8NBU5 361 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 DNERQ8NFT8 737 aa5.7□□□□□ -1.5
BRCA1-203ENST00000357654 OR4L1Q8NH43 312 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms