RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 COQ10BQ9H8M1 238 aa11.54□□□□□ -0.56
COL9A1-202ENST00000357250 MAGEE1Q9HCI5 957 aa11.54□□□□□ -0.56
COL9A1-202ENST00000357250 PTBP2Q9UKA9 531 aaKnown RBP11.54□□□□□ -0.56
COL9A1-202ENST00000357250 FCF1Q9Y324 198 aaKnown RBP11.54□□□□□ -0.56
COL9A1-202ENST00000357250 OR2AG2A6NM03 316 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 RNASEH2AO75792 299 aaKnown RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 HMGN1P05114 100 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 NT5EP21589 574 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 CDH12P55289 794 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 MERTKQ12866 999 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 TRIM32Q13049 653 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ZC3HC1Q86WB0 502 aaKnown RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 LCN9Q8WX39 176 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 VRTNQ9H8Y1 702 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 SCML2Q9UQR0 700 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 A8MT66 165 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 PLOD3O60568 738 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 STARP49675 285 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 MTTPP55157 894 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF155Q12901 538 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 IL18R1Q13478 541 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 UBXN11Q5T124 520 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 EGFLAMQ63HQ2 1017 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 KLHL24Q6TFL4 600 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 USP43Q70EL4 1123 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 GPR65Q8IYL9 337 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ARL14EPQ8N8R7 260 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 KLHL32Q96NJ5 620 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ZSCAN5AQ9BUG6 496 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 TNKS2Q9H2K2 1166 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 SLC32A1Q9H598 525 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 SUV39H2Q9H5I1 410 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 SPATA7Q9P0W8 599 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 GPN3Q9UHW5 284 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF221Q9UK13 617 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 CNOT6Q9ULM6 557 aaKnown RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 A0A0U1RQF3 1178 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF99A8MXY4 864 aaPredicted RBP11.53□□□□□ -0.56
COL9A1-202ENST00000357250 UBXN7O94888 489 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 HLA-DQB2P05538 268 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ZNF30P17039 623 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ATP4BP51164 291 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 AQP4P55087 323 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 ECT2LQ008S8 904 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 SERINC3Q13530 473 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 NR4A3Q92570 626 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 CRELD1Q96HD1 420 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 FCRL4Q96PJ5 515 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 TUBGCP5Q96RT8 1024 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 TRIM2Q9C040 744 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 PIGVQ9NUD9 493 aa11.53□□□□□ -0.56
COL9A1-202ENST00000357250 FAM149AA5PLN7 773 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 PSMD11O00231 422 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 CA12O43570 354 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 OR1F1O43749 312 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 ZBTB11O95625 1053 aaPredicted RBP11.52□□□□□ -0.56
COL9A1-202ENST00000357250 SERPINA3P01011 423 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 GSTM3P21266 225 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 ACADLP28330 430 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 ZFP69Q49AA0 526 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 PAMR1Q6UXH9 720 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 CTU1Q7Z7A3 348 aaKnown RBP11.52□□□□□ -0.56
COL9A1-202ENST00000357250 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.52□□□□□ -0.56
COL9A1-202ENST00000357250 ATCAYQ86WG3 371 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 NUDT13Q86X67 352 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 KREMEN2Q8NCW0 462 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 SNX33Q8WV41 574 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 SLC9A6Q92581 669 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 C11orf24Q96F05 449 aaPredicted RBP11.52□□□□□ -0.56
COL9A1-202ENST00000357250 COPS4Q9BT78 406 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 MOCS1Q9NZB8 636 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 VPS29Q9UBQ0 182 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 PCDHGB1Q9Y5G3 927 aa11.52□□□□□ -0.56
COL9A1-202ENST00000357250 OAS3Q9Y6K5 1087 aaKnown RBP11.52□□□□□ -0.56
COL9A1-202ENST00000357250 CCNKO75909 580 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 IFNA6P05013 189 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 PGRP06401 933 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 BLKP51451 505 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 FCHO2Q0JRZ9 810 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 IL18Q14116 193 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 FBXO43Q4G163 708 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 SLC9B1Q4ZJI4 515 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 SYPL2Q5VXT5 272 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 PSRC1Q6PGN9 363 aaPredicted RBP11.52□□□□□ -0.57
COL9A1-202ENST00000357250 KCTD8Q6ZWB6 473 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 PARGQ86W56 976 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 AVL9Q8NBF6 648 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 LRRC58Q96CX6 371 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 RBM18Q96H35 190 aaKnown RBP11.52□□□□□ -0.57
COL9A1-202ENST00000357250 MOV10Q9HCE1 1003 aaKnown RBP11.52□□□□□ -0.57
COL9A1-202ENST00000357250 ACSS2Q9NR19 701 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 MCUBQ9NWR8 336 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 EURLQ9NYK6 297 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 BTN3A3O00478 584 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 CCL16O15467 120 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 C8AP07357 584 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 GIMD1P0DJR0 217 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 DNAJA1P31689 397 aaKnown RBP11.52□□□□□ -0.57
COL9A1-202ENST00000357250 MAGEA11P43364 429 aa11.52□□□□□ -0.57
COL9A1-202ENST00000357250 PLEKHG6Q3KR16 790 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms