RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 ARL4DP49703 201 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 PRKAA1Q13131 559 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 TPSAB1Q15661 275 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 SPESP1Q6UW49 350 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 GSTA5Q7RTV2 222 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 PRICKLE2Q7Z3G6 844 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 CAND1Q86VP6 1230 aaKnown RBP16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 TMEM126BQ8IUX1 230 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 TBC1D21Q8IYX1 336 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 SLC22A15Q8IZD6 547 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 C2orf73Q8N5S3 287 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 OR5K2Q8NHB8 316 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 UBE2Q2Q8WVN8 375 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 KIFC1Q9BW19 673 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 CARD6Q9BX69 1037 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 TRIM55Q9BYV6 548 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 SLC25A18Q9H1K4 315 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 CHST8Q9H2A9 424 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 ACTL8Q9H568 366 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 ZNF71Q9NQZ8 489 aaPredicted RBP16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 PCDHGA6Q9Y5G7 932 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 NFS1Q9Y697 457 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 NUP210LQ5VU65 1888 aa16.18■□□□□ 0.18
PDLIM7-201ENST00000355572 TENM4Q6N022 2769 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 PIPSLA2A3N6 862 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 CDC14CA4D256 554 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 J3QKU1 62 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 ZNF185O15231 689 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 DNAJB5O75953 348 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 GAS8O95995 478 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 PDGFAP04085 211 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 GSTM1P09488 218 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 AOAHP28039 575 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 PKLRP30613 574 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 CCR10P46092 362 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 FOXL2P58012 376 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 GSTM4Q03013 218 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 HSPA14Q0VDF9 509 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 GPS1Q13098 491 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 PTCHD3Q3KNS1 767 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 SYTL3Q4VX76 610 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 ZNF385CQ66K41 422 aaPredicted RBP16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 LRRC8BQ6P9F7 803 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 FAM198BQ6UWH4 519 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 CARFQ8N187 725 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 CPT1BQ92523 772 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 PEX13Q92968 403 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 ABHD17AQ96GS6 310 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 BIRC8Q96P09 236 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 FCRL4Q96PJ5 515 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 LATS2Q9NRM7 1088 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 PCMTD2Q9NV79 361 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 TSR3Q9UJK0 312 aaKnown RBP16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 SOX13Q9UN79 622 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 ANKRD12Q6UB98 2062 aa16.17■□□□□ 0.18
PDLIM7-201ENST00000355572 HEATR5BQ9P2D3 2071 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 C2orf74A8MZ97 194 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 SUV39H1O43463 412 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 NRP2O60462 931 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 CPNE3O75131 537 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 NIPSNAP2O75323 286 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 VAPBO95292 243 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 KRT14P02533 472 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 MAGEA6P43360 314 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 BDKRB1P46663 353 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 NPY2RP49146 381 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 CHAF1BQ13112 559 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 CRTC2Q53ET0 693 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 LYPLAL1Q5VWZ2 237 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 CPZQ66K79 652 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 NLRP9Q7RTR0 991 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 TAX1BP1Q86VP1 789 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 DSELQ8IZU8 1212 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 C19orf47Q8N9M1 422 aaKnown RBP16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 CFAP61Q8NHU2 1237 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 MR1Q95460 341 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 FAM136AQ96C01 138 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 CATSPER2Q96P56 530 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 EFHD1Q9BUP0 239 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 IL22Q9GZX6 179 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 SPRTNQ9H040 489 aaPredicted RBP16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 GRPEL1Q9HAV7 217 aa16.16■□□□□ 0.18
PDLIM7-201ENST00000355572 MDC1Q14676 2089 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 USP27XA6NNY8 438 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 GOLGA8MH3BSY2 632 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 QSOX1O00391 747 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 PRMT5O14744 637 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 SLCO2B1O94956 709 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 SHMT2P34897 504 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 COILP38432 576 aaPredicted RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 YBX1P67809 324 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 CYP1B1Q16678 543 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 KYNUQ16719 465 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 CENPUQ71F23 418 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 APOBEC4Q8WW27 367 aaKnown RBP16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 MAIP1Q8WWC4 291 aa16.15■□□□□ 0.18
PDLIM7-201ENST00000355572 LPGAT1Q92604 370 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms