RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 BLOC1S3Q6QNY0 202 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 WDR60Q8WVS4 1066 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 GPATCH1Q9BRR8 931 aaKnown RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 BTRCQ9Y297 605 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 LOC100653049A0A140TA62 436 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MANBAO00462 879 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 KRT34O76011 436 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 ERGP11308 486 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MXRA7P84157 204 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 TBL3Q12788 808 aaKnown RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MAD2L1Q13257 205 aaPredicted RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 RCAN2Q14206 197 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 GK5Q6ZS86 529 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 DEFB107AQ8IZN7 70 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 JADE3Q92613 823 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MARK4Q96L34 752 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 OR52A5Q9H2C5 316 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MRPL40Q9NQ50 206 aaKnown RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 STOX2Q9P2F5 926 aaPredicted RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 BAIAP2L1Q9UHR4 511 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 IGLON5A6NGN9 336 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 C2CD4DB7Z1M9 353 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 LOC730098B7Z3J9 87 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 ANKRD28O15084 1053 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 INPP4BO15327 924 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 NRP2O60462 931 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 CIB2O75838 187 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 TIE1P35590 1138 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 AGKQ53H12 422 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 LRRC56Q8IYG6 542 aaPredicted RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 SLC44A3Q8N4M1 653 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 PLA2G15Q8NCC3 412 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 SERPINI1Q99574 410 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MRPL1Q9BYD6 325 aaKnown RBP16.78■□□□□ 0.28
VPS13B-201ENST00000355155 OR2AG1Q9H205 316 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 SLC2A4RGQ9NR83 387 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 SERGEFQ9UGK8 458 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 TSC22D4Q9Y3Q8 395 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 ANGPTL3Q9Y5C1 460 aa16.78■□□□□ 0.28
VPS13B-201ENST00000355155 MBTPS2O43462 519 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 NPPAP01160 153 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 GNAZP19086 355 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 RGS19P49795 217 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 HTR6P50406 440 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 SFSWAPQ12872 951 aaKnown RBP16.77■□□□□ 0.28
VPS13B-201ENST00000355155 FGL2Q14314 439 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 STARD3Q14849 445 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 KPNB1Q14974 876 aaKnown RBP16.77■□□□□ 0.28
VPS13B-201ENST00000355155 ZNF423Q2M1K9 1284 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 PTCHD3Q3KNS1 767 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 KIAA1211LQ6NV74 962 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.77■□□□□ 0.28
VPS13B-201ENST00000355155 MBOAT1Q6ZNC8 495 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 FAM161BQ96MY7 647 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 FOPNLQ96NB1 174 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 PCDHGA7Q9Y5G6 932 aa16.77■□□□□ 0.28
VPS13B-201ENST00000355155 RGS14O43566 566 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 HMOX2P30519 316 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 NUDT2P50583 147 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 HNRNPFP52597 415 aaKnown RBP16.77■□□□□ 0.27
VPS13B-201ENST00000355155 PNLIPRP1P54315 467 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 ABRAXAS2Q15018 415 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 C10orf62Q5T681 223 aaPredicted RBP16.77■□□□□ 0.27
VPS13B-201ENST00000355155 PRR23BQ6ZRT6 265 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 KBTBD6Q86V97 674 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 CDK15Q96Q40 435 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 SGPP1Q9BX95 441 aa16.77■□□□□ 0.27
VPS13B-201ENST00000355155 LAMA2P24043 3122 aaKnown RBP16.77■□□□□ 0.27
VPS13B-201ENST00000355155 ATP6AP2A0A1C7CYW4 349 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 H3BM21 787 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 FKBP6O75344 327 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 ATP6AP2O75787 350 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 RSL1D1O76021 490 aaKnown RBP16.76■□□□□ 0.27
VPS13B-201ENST00000355155 JUPP14923 745 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 COL9A1P20849 921 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 JAK1P23458 1154 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 GDF5P43026 501 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 ATP6AP1LQ52LC2 224 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 C6orf163Q5TEZ5 329 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 ZFAND4Q86XD8 727 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 DENND6BQ8NEG7 585 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 ABCD2Q9UBJ2 740 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 A0A1W2PP55 124 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 POP7O75817 140 aaKnown RBP16.76■□□□□ 0.27
VPS13B-201ENST00000355155 KRT6AP02538 564 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 KRT6BP04259 564 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 MAP4P27816 1152 aaKnown RBP16.76■□□□□ 0.27
VPS13B-201ENST00000355155 KRT6CP48668 564 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 GRSF1Q12849 480 aaKnown RBP eCLIP16.76■□□□□ 0.27
VPS13B-201ENST00000355155 FAM219BQ5XKK7 198 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 PRMT9Q6P2P2 845 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 PAOXQ6QHF9 649 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 BNC2Q6ZN30 1099 aaPredicted RBP16.76■□□□□ 0.27
VPS13B-201ENST00000355155 RIPOR1Q6ZS17 1223 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 PDZD3Q86UT5 571 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 MINDY1Q8N5J2 469 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 PKP4Q99569 1192 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 MKRN2Q9H000 416 aaKnown RBP16.76■□□□□ 0.27
VPS13B-201ENST00000355155 WDR41Q9HAD4 459 aa16.76■□□□□ 0.27
VPS13B-201ENST00000355155 NOP53Q9NZM5 478 aaKnown RBP16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms