RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 WRAP53Q9BUR4 548 aaKnown RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ACTL8Q9H568 366 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ARL15Q9NXU5 204 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 ABCD2Q9UBJ2 740 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 GULP1Q9UBP9 304 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 SUCOQ9UBS9 1254 aaKnown RBP6.76□□□□□ -1.33
TRIM55-203ENST00000350034 CROTQ9UKG9 612 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 RNF11Q9Y3C5 154 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 FADS3Q9Y5Q0 445 aa6.76□□□□□ -1.33
TRIM55-203ENST00000350034 C2orf16Q68DN1 1984 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 C17orf113A0A1B0GUU1 675 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 DYTNA2CJ06 578 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ASPDHA6ND91 283 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PRORSD1PA6NEY8 169 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 OR2AG2A6NM03 316 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PLK4O00444 970 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 NR5A2O00482 541 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 LIN7AO14910 233 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CASQ2O14958 399 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 NPC1O15118 1278 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 NVLO15381 856 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CFLARO15519 480 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 MAP3K7O43318 606 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 AP1G1O43747 822 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 SYNCRIPO60506 623 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 MMP20O60882 483 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 EEDO75530 441 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 SLC22A3O75751 556 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CLDN9O95484 217 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CAPNS1P04632 268 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 APODP05090 189 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 HIST1H2AGP0C0S8 130 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PCSK2P16519 638 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 HIST1H2ADP20671 130 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PRPH2P23942 346 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 TEAD1P28347 426 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 HMOX2P30519 316 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 DRD3P35462 400 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 P2RY2P41231 377 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 KIR2DL1P43626 348 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CCR3P51677 355 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PFN3P60673 137 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 UFM1P61960 85 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 NHLH1Q02575 133 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF33BQ06732 778 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 BOP1Q14137 746 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 E2F2Q14209 437 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 TRIM25Q14258 630 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 COL19A1Q14993 1142 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 KIAA0040Q15053 153 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 AGERQ15109 404 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 RPS6KA2Q15349 733 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CCDC6Q16204 474 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 AP5B1Q2VPB7 878 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PTCHD3Q3KNS1 767 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ITPRIPL2Q3MIP1 535 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 MMEL1Q495T6 779 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 VPS26BQ4G0F5 336 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 SAMD4BQ5PRF9 694 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 FAM46CQ5VWP2 391 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ZFP1Q6P2D0 407 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PRMT9Q6P2P2 845 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 TMEM220Q6QAJ8 160 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ADAMTSL4Q6UY14 1074 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ERMP1Q7Z2K6 904 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 DHDDSQ86SQ9 333 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ZFAND4Q86XD8 727 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 MMAAQ8IVH4 418 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 YAF2Q8IY57 180 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 DPP10Q8N608 796 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 BEND7Q8N7W2 519 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PROKR1Q8TCW9 393 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 FGF14Q92915 247 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ATP6V1E2Q96A05 226 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 FAM131CQ96AQ9 280 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 CCDC124Q96CT7 223 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ASB9Q96DX5 294 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 SPDL1Q96EA4 605 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 COX14Q96I36 57 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 HIST1H2AHQ96KK5 128 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 TEX37Q96LM6 180 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 MAGEB10Q96LZ2 347 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ZNF570Q96NI8 536 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 HIST1H2AJQ99878 128 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 KXD1Q9BQD3 176 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 H2AFJQ9BTM1 129 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 RPP25Q9BUL9 199 aaKnown RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 RSPH9Q9H1X1 276 aaPredicted RBP6.75□□□□□ -1.33
TRIM55-203ENST00000350034 TRIM39Q9HCM9 518 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 SPAG4Q9NPE6 437 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 DNAJC11Q9NVH1 559 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 NMRK1Q9NWW6 199 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 EPS15L1Q9UBC2 864 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 BCAP29Q9UHQ4 241 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 MCM8Q9UJA3 840 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 PACSIN3Q9UKS6 424 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 COQ6Q9Y2Z9 468 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 ANGPTL3Q9Y5C1 460 aa6.75□□□□□ -1.33
TRIM55-203ENST00000350034 STON1Q9Y6Q2 735 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms