RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 PDSS1Q5T2R2 415 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 SLC29A4Q7RTT9 530 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 TESCQ96BS2 214 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 MFSD3Q96ES6 412 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 DUSP26Q9BV47 211 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 A0A0G2JLL6 359 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 CCL22O00626 93 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 AKAP8O43823 692 aaKnown RBP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 ECHS1P30084 290 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 PRRT2Q7Z6L0 340 aaPredicted RBP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 MED28Q9H204 178 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 CARS2Q9HA77 564 aaKnown RBP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 ACTR1BP42025 376 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 ACTR1AP61163 376 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 MFSD5Q6N075 450 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 FKBP7Q9Y680 259 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 hCG_2039718K7EN88 272 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 TRMUO75648 421 aaKnown RBP22.7■■□□□ 1.22
NPAS3-201ENST00000346562 ADH5P11766 374 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 ECT2LQ008S8 904 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 CRY2Q49AN0 593 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 FSTL4Q6MZW2 842 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 PAOXQ6QHF9 649 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 USP30Q70CQ3 517 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 OXR1Q8N573 874 aa22.7■■□□□ 1.22
NPAS3-201ENST00000346562 CXCR1P25024 350 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 MSX2P35548 267 aaPredicted RBP22.69■■□□□ 1.22
NPAS3-201ENST00000346562 PRKCZQ05513 592 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 FSTL1Q12841 308 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 RAB30Q15771 203 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 GDPD4Q6W3E5 623 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 SATL1Q86VE3 508 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 ZNF599Q96NL3 588 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 SNX10Q9Y5X0 201 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 TIE1P35590 1138 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 TYSND1Q2T9J0 566 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 ABCA11PQ4W5N1 156 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 KLHL26Q53HC5 615 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 ANKRD46Q86W74 232 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 CAMK1GQ96NX5 476 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 CRTAC1Q9NQ79 661 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 PCDHGB1Q9Y5G3 927 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 MAP2P11137 1827 aaKnown RBP22.69■■□□□ 1.22
NPAS3-201ENST00000346562 AREL1O15033 823 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 CYP17A1P05093 508 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 SNHG28P0DPA3 235 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 YAP1P46937 504 aaKnown RBP22.69■■□□□ 1.22
NPAS3-201ENST00000346562 RPL19P84098 196 aaKnown RBP22.69■■□□□ 1.22
NPAS3-201ENST00000346562 TPST2O60704 377 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 ACRP10323 421 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 HCAR3P49019 387 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 HAPLN3Q96S86 360 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 ACSS2Q9NR19 701 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 IGSF9Q9P2J2 1179 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 CNTN6Q9UQ52 1028 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 C2CD4BA6NLJ0 364 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 S100A6P06703 90 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 CLCN4P51793 760 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 OR10A6Q8NH74 314 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 OVCA2Q8WZ82 227 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 SLC39A3Q9BRY0 314 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 TMEM175Q9BSA9 504 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 NMUR2Q9GZQ4 415 aa22.69■■□□□ 1.22
NPAS3-201ENST00000346562 PCDH7O60245 1069 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 SRPRAP08240 638 aaKnown RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 OC90Q02509 493 aaPredicted RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 GPR33Q49SQ1 333 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 EOGTQ5NDL2 527 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 SLC13A3Q8WWT9 602 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 OR51V1Q9H2C8 321 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 TFB2MQ9H5Q4 396 aaKnown RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 ZNF221Q9UK13 617 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 KIF1AQ12756 1690 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 MYBPHLA2RUH7 354 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 CAND1Q86VP6 1230 aaKnown RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 DCBLD1Q8N8Z6 715 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 PPP1R11O60927 126 aaPredicted RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 BMP6P22004 513 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 UGT1A3P35503 534 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 ADAM8P78325 824 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 KIAA0930Q6ICG6 404 aaPredicted RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 CPED1A4D0V7 1026 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 OR14I1A6ND48 311 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 GHRHRQ02643 423 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 SCN1BQ07699 218 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 GDF6Q6KF10 455 aaPredicted RBP22.68■■□□□ 1.22
NPAS3-201ENST00000346562 NKD1Q969G9 470 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 CFL2Q9Y281 166 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 PEX16Q9Y5Y5 336 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 ARL5AQ9Y689 179 aa22.68■■□□□ 1.22
NPAS3-201ENST00000346562 TOR1AIP1Q5JTV8 583 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 PNLDC1Q8NA58 520 aaKnown RBP22.67■■□□□ 1.22
NPAS3-201ENST00000346562 ACDQ96AP0 544 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 BCL9LQ86UU0 1499 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 DAPL1A0PJW8 107 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 K7EPI3 171 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 SCARB2Q14108 478 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 FBXO48Q5FWF7 155 aa22.67■■□□□ 1.22
NPAS3-201ENST00000346562 CLNKQ7Z7G1 428 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms