RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 YAP1P46937 504 aaKnown RBP14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 CYP4F3Q08477 520 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 SLC22A15Q8IZD6 547 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 CBARPQ8N350 705 aaPredicted RBP14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 BDH2Q9BUT1 245 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 SLC6A13Q9NSD5 602 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 SLC25A37Q9NYZ2 338 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 LIMD1Q9UGP4 676 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 UTS2RQ9UKP6 389 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 DLGAP4Q9Y2H0 992 aa14.56□□□□□ -0.08
VIPAS39-202ENST00000343765 SCN8AQ9UQD0 1980 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 WDR47O94967 919 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 LRATO95237 230 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 GSNP06396 782 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 C1SP09871 688 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 BCKDHAP12694 445 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CSF2RAP15509 400 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 MSH3P20585 1137 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 ITPKAP23677 461 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CCR2P41597 374 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 VEGFBP49765 207 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 IST1P53990 364 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 ZXDCQ2QGD7 858 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 POM121L1PQ3SYA9 428 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CYBRD1Q53TN4 286 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 AP1ARQ63HQ0 302 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 GCNT7Q6ZNI0 430 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 RNF175Q8N4F7 328 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 HM13Q8TCT9 377 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 SELENOMQ8WWX9 145 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 GFM2Q969S9 779 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 HIC2Q96JB3 615 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TSSK3Q96PN8 268 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 NTMT1Q9BV86 223 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 BRD9Q9H8M2 597 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 RC3H2Q9HBD1 1191 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 C1orf109Q9NX04 203 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TRPS1Q9UHF7 1281 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TBX21Q9UL17 535 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CHD9Q3L8U1 2897 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 OBSL1O75147 1896 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CLGNO14967 610 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 FGF18O76093 207 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CAPGP40121 348 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 PPP1R8Q12972 351 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 MAD2L1Q13257 205 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 LAPTM5Q13571 262 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 FAM98BQ52LJ0 330 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 MPP7Q5T2T1 576 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CHST15Q7LFX5 561 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TRIM46Q7Z4K8 759 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 MSRB3Q8IXL7 192 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 BEND7Q8N7W2 519 aaPredicted RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 BPIFB1Q8TDL5 484 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 UBTD2Q8WUN7 234 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 SCAMP4Q969E2 229 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 NCLNQ969V3 563 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TMBIM1Q969X1 311 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 PARVBQ9HBI1 364 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TMEM45AQ9NWC5 275 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 RSL24D1Q9UHA3 163 aaKnown RBP14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 CIDEBQ9UHD4 219 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 TMPRSS11EQ9UL52 423 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 ZNF510Q9Y2H8 683 aa14.55□□□□□ -0.08
VIPAS39-202ENST00000343765 GRXCR2A6NFK2 248 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 OR56A5P0C7T3 313 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 TCF3P15923 654 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ITGB8P26012 769 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 MTHFRP42898 656 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ALDH3B2P48448 385 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 CHRNB3Q05901 458 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 FXNQ16595 210 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ZNF648Q5T619 568 aaPredicted RBP14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 STK32CQ86UX6 486 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 RIMKLAQ8IXN7 391 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 CLEC4FQ8N1N0 589 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 TNIP2Q8NFZ5 429 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 OR8J3Q8NGG0 315 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 TCEAL4Q96EI5 215 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 PHF12Q96QT6 1004 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 LYSMD1Q96S90 227 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ATG10Q9H0Y0 220 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 SLC32A1Q9H598 525 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ELOVL6Q9H5J4 265 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 OCEL1Q9H607 264 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 NTN4Q9HB63 628 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 RDH14Q9HBH5 336 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 PRM3Q9NNZ6 103 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 ADGRE2Q9UHX3 823 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 SLC25A13Q9UJS0 675 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 INVSQ9Y283 1065 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 HEMK1Q9Y5R4 338 aaPredicted RBP14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 PABPN1LA6NDY0 278 aaKnown RBP14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 IFRD1O00458 451 aaPredicted RBP14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 KRT6AP02538 564 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 KRT6BP04259 564 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 KRT6CP48668 564 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 WDR5P61964 334 aaKnown RBP14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 PGS1Q32NB8 556 aa14.54□□□□□ -0.08
VIPAS39-202ENST00000343765 PTCHD3Q3KNS1 767 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms