RNA–Protein interactions for RNA: ENST00000341307.6

RTN3-203, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-203ENST00000341307 UGP2Q16851 508 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 AGKQ53H12 422 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 FAM35AQ86V20 835 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TCTE3Q8IZS6 198 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 OR8K3Q8NH51 312 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TMEM209Q96SK2 561 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 SLC30A3Q99726 388 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 RTP3Q9BQQ7 232 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 ULBP1Q9BZM6 244 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 TNKS2Q9H2K2 1166 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 SP110Q9HB58 689 aa11.63□□□□□ -0.55
RTN3-203ENST00000341307 INTS7Q9NVH2 962 aaKnown RBP11.63□□□□□ -0.55
RTN3-203ENST00000341307 MAGED1Q9Y5V3 778 aaPredicted RBP11.63□□□□□ -0.55
RTN3-203ENST00000341307 YJEFN3A6XGL0 299 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 TMEM233B4DJY2 109 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 F5H423 210 aaPredicted RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 DSCR3O14972 297 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 HMGN1P05114 100 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ALPLP05186 524 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 APRTP07741 180 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 USP17L7P0C7H9 530 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 TGFBR2P37173 567 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 SLC15A1P46059 708 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ALDH3A2P51648 485 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ACLYP53396 1101 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ALDH6A1Q02252 535 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 EPS8Q12929 822 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 SEMA5AQ13591 1074 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 FASTKQ14296 549 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 SYT6Q5T7P8 510 aaPredicted RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 CACHD1Q5VU97 1274 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 TYW3Q6IPR3 259 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 XKRXQ6PP77 449 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 YIPF7Q8N8F6 280 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 KLHL15Q96M94 604 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 IFT46Q9NQC8 304 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 OXSMQ9NWU1 459 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ZNF224Q9NZL3 707 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 VTI1BQ9UEU0 232 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 EYSQ5T1H1 3165 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 A0A0B4J293 547 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 A0A0U1RQF3 1178 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 TCRBV5S2A0A599 114 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 EFCAB9A8MZ26 197 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 M0QYT0 321 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 EEF2KO00418 725 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 ARPC2O15144 300 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 XPNPEP2O43895 674 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 B4GALT3O60512 393 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 SLC22A5O76082 557 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 LDLRP01130 860 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 S100A6P06703 90 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 GPIP06744 558 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 MTHFD1P11586 935 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 HTR7P34969 479 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 PIGAP37287 484 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 RPS5P46782 204 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 MASP1P48740 699 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 BTN1A1Q13410 526 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 CLCA4Q14CN2 919 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 SMAD1Q15797 465 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 DPYSL2Q16555 572 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 AANATQ16613 207 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 CYP51A1Q16850 503 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 AAK1Q2M2I8 961 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 PIK3R6Q5UE93 754 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 HACD2Q6Y1H2 254 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 MRPL10Q7Z7H8 261 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 ST13P5Q8NFI4 369 aaPredicted RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 WDR48Q8TAF3 677 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 RNF31Q96EP0 1072 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 TRMT61AQ96FX7 289 aaKnown RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 TEKT5Q96M29 485 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 RPRD1AQ96P16 312 aaPredicted RBP11.62□□□□□ -0.55
RTN3-203ENST00000341307 CSPG4P5Q96PW8 444 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ZNF670Q9BS34 389 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 CDADC1Q9BWV3 514 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 ANAPC2Q9UJX6 822 aa11.62□□□□□ -0.55
RTN3-203ENST00000341307 H0Y626 953 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 TFECO14948 347 aaPredicted RBP11.61□□□□□ -0.55
RTN3-203ENST00000341307 IFNA14P01570 189 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 FTH1P02794 183 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 GRIA4P48058 902 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 BLVRAP53004 296 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 OLR1P78380 273 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 IRF9Q00978 393 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 PRKAA1Q13131 559 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 BAMBIQ13145 260 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 DAG1Q14118 895 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 SLC25A52Q3SY17 297 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 DENND5AQ6IQ26 1287 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 CD300LGQ6UXG3 332 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 TMPRSS9Q7Z410 1059 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 RNF180Q86T96 592 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 GPAT4Q86UL3 456 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 KIF18BQ86Y91 864 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 BBS7Q8IWZ6 715 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 PAPD5Q8NDF8 572 aaKnown RBP11.61□□□□□ -0.55
RTN3-203ENST00000341307 EDEM1Q92611 657 aa11.61□□□□□ -0.55
RTN3-203ENST00000341307 AKAP1Q92667 903 aaKnown RBP eCLIP11.61□□□□□ -0.553e-8■■■■□ 20.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms