RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 OR5K2Q8NHB8 316 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 UBXN4Q92575 508 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 EXTL1Q92935 676 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 SNF8Q96H20 258 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 PPM1MQ96MI6 270 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 PANX3Q96QZ0 392 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 CD180Q99467 661 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 CTRCQ99895 268 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 TRIM31Q9BZY9 425 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 SRMSQ9H3Y6 488 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 XKR8Q9H6D3 395 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 C20orf96Q9NUD7 363 aaPredicted RBP14.94□□□□□ -0.02
VAPA-201ENST00000340541 INTS10Q9NVR2 710 aaKnown RBP14.94□□□□□ -0.02
VAPA-201ENST00000340541 GALPQ9UBC7 116 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 POMT2Q9UKY4 750 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 MED16Q9Y2X0 877 aa14.94□□□□□ -0.02
VAPA-201ENST00000340541 MYO18BQ8IUG5 2567 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 TLCD2A6NGC4 264 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 EFCAB8A8MWE9 144 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 SMAPO00193 183 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 BTN3A1O00481 513 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 POLR2CP19387 275 aaPredicted RBP14.93□□□□□ -0.02
VAPA-201ENST00000340541 SLC1A2P43004 574 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 C2orf54Q08AI8 447 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 NFATC3Q12968 1075 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 GRB7Q14451 532 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 TBR1Q16650 682 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 BBS9Q3SYG4 887 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 DNAJC21Q5F1R6 531 aaKnown RBP14.93□□□□□ -0.02
VAPA-201ENST00000340541 DNTTIP2Q5QJE6 756 aaKnown RBP14.93□□□□□ -0.02
VAPA-201ENST00000340541 DCAF12Q5T6F0 453 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 ZNF549Q6P9A3 640 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 AMIGO1Q86WK6 493 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 LMNTD2Q8IXW0 634 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 ADGRF3Q8IZF5 1079 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.93□□□□□ -0.021e-12■■■■■ 60.9
VAPA-201ENST00000340541 NKD1Q969G9 470 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 TEFMQ96QE5 360 aaKnown RBP14.93□□□□□ -0.02
VAPA-201ENST00000340541 MENTQ9BUN1 341 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 ADNPQ9H2P0 1102 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 TRIT1Q9H3H1 467 aaKnown RBP14.93□□□□□ -0.02
VAPA-201ENST00000340541 FBXO6Q9NRD1 293 aaPredicted RBP14.93□□□□□ -0.02
VAPA-201ENST00000340541 LATS2Q9NRM7 1088 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 SNX24Q9Y343 169 aa14.93□□□□□ -0.02
VAPA-201ENST00000340541 H3BMM5 538 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 PFDN6O15212 129 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 RAD51CO43502 376 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 PKMP14618 531 aaKnown RBP14.92□□□□□ -0.02
VAPA-201ENST00000340541 ELK3P41970 407 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 CBLBQ13191 982 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 SRSF6Q13247 344 aaKnown RBP14.92□□□□□ -0.02
VAPA-201ENST00000340541 THOC5Q13769 683 aaKnown RBP14.92□□□□□ -0.02
VAPA-201ENST00000340541 TMED2Q15363 201 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 HSP90AA5PQ58FG0 334 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 SPANXN3Q5MJ09 141 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 PLEKHS1Q5SXH7 462 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 FBXO38Q6PIJ6 1188 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 UNC5DQ6UXZ4 953 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 ATG14Q6ZNE5 492 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 OTOAQ7RTW8 1153 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 VASH2Q86V25 355 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 KCNMB4Q86W47 210 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 KMT5CQ86Y97 462 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 SPNS2Q8IVW8 549 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 PDIK1LQ8N165 341 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 C16orf45Q96MC5 204 aaPredicted RBP14.92□□□□□ -0.02
VAPA-201ENST00000340541 NAT9Q9BTE0 207 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 SLC12A9Q9BXP2 914 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 GEMIN8Q9NWZ8 242 aaKnown RBP14.92□□□□□ -0.02
VAPA-201ENST00000340541 IL17BQ9UHF5 180 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 POLG2Q9UHN1 485 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 FBXO5Q9UKT4 447 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 VPS9D1Q9Y2B5 631 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 TEX264Q9Y6I9 313 aa14.92□□□□□ -0.02
VAPA-201ENST00000340541 SNRNP200O75643 2136 aaKnown RBP14.92□□□□□ -0.02
VAPA-201ENST00000340541 FAM187AA6NFU0 413 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 MATN2O00339 956 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 KPNA5O15131 536 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 POLR1CO15160 346 aaPredicted RBP14.91□□□□□ -0.02
VAPA-201ENST00000340541 SUV39H1O43463 412 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 TTC4O95801 387 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 ERVK-10P10266 1014 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 FOLR1P15328 257 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 PRDX3P30048 256 aaKnown RBP14.91□□□□□ -0.02
VAPA-201ENST00000340541 CLCN7P51798 805 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 MPP1Q00013 466 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 ABRQ12979 859 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 KCNAB1Q14722 419 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 HIF1AQ16665 826 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 HP1BP3Q5SSJ5 553 aaPredicted RBP14.91□□□□□ -0.02
VAPA-201ENST00000340541 STEAP4Q687X5 459 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 ARMC6Q6NXE6 501 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 CEACAM20Q6UY09 585 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 UNC5AQ6ZN44 842 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 PRICKLE2Q7Z3G6 844 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 CNTN4Q8IWV2 1026 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 CARFQ8N187 725 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 D2HGDHQ8N465 521 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 GIMAP7Q8NHV1 300 aa14.91□□□□□ -0.02
VAPA-201ENST00000340541 FLVCR1-AS1Q8TAF5 88 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms