RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 OTUD6BQ8N6M0 293 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 PHC3Q8NDX5 983 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 OR5AR1Q8NGP9 310 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 COG1Q8WTW3 980 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 SEC14L1Q92503 715 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 MFSD3Q96ES6 412 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 CHRNA10Q9GZZ6 450 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 P2RY12Q9H244 342 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 MARCH4Q9P2E8 410 aaPredicted RBP12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 PADI1Q9ULC6 663 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 PYCARDQ9ULZ3 195 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 ICKQ9UPZ9 632 aa12.93□□□□□ -0.34
SIRPB3P-201ENST00000340424 LOC101059948A0A1B0GTJ6 334 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PIPSLA2A3N6 862 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 BTN3A3O00478 584 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 RECKO95980 971 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 ESR1P03372 595 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 ARNTP27540 789 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 ARCN1P48444 511 aaKnown RBP12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PRKG2Q13237 762 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 KCNAB1Q14722 419 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 BRD3Q15059 726 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PLEKHS1Q5SXH7 462 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PWWP2BQ6NUJ5 590 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 CASC4Q6P4E1 433 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 TTC23LQ6PF05 361 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 BORAQ6PGQ7 559 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 SPESP1Q6UW49 350 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 MICALCLQ6ZW33 695 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 OTOAQ7RTW8 1153 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PCGF5Q86SE9 256 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 CAND1Q86VP6 1230 aaKnown RBP12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 DCUN1D3Q8IWE4 304 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 LMNTD2Q8IXW0 634 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PPIL6Q8IXY8 311 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 GALNT6Q8NCL4 622 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLCO2A1Q92959 643 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 ZNF501Q96CX3 271 aaPredicted RBP12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 LRFN5Q96NI6 719 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 RUNDC3BQ96NL0 473 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 SERPINB12Q96P63 405 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 RAB11FIP5Q9BXF6 653 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 INTS10Q9NVR2 710 aaKnown RBP12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 TRMT1Q9NXH9 659 aaKnown RBP12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 ACTR10Q9NZ32 417 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 CDYLQ9Y232 598 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PCDHB3Q9Y5E6 796 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 PCDHGA6Q9Y5G7 932 aa12.92□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLC9B1P1A6NJY1 282 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 SCRG1O75711 98 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TMEM63AO94886 807 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 ZNF28P17035 718 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 ATP5DP30049 168 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 DLSTP36957 453 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 MAGEA3P43357 314 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 RAB28P51157 221 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 DHX34Q14147 1143 aaKnown RBP12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 KIR2DS3Q14952 304 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 PPP1R7Q15435 360 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TBR1Q16650 682 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 ANKRD22Q5VYY1 191 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 UNC5AQ6ZN44 842 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 LDB1Q86U70 411 aaPredicted RBP12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TMEM135Q86UB9 458 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 CILP2Q8IUL8 1156 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TMEM126BQ8IUX1 230 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 RAB42Q8N4Z0 105 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 NAT8LQ8N9F0 302 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 GABPB2Q8TAK5 448 aaPredicted RBP12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 MAGEC3Q8TD91 643 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 STARD8Q92502 1023 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 LPGAT1Q92604 370 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLC22A18Q96BI1 424 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TCTN2Q96GX1 697 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 ELMO2Q96JJ3 720 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 FOPNLQ96NB1 174 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 GPR87Q9BY21 358 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TWSG1Q9GZX9 223 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 ADNPQ9H2P0 1102 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 LHX9Q9NQ69 397 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 PCYOX1Q9UHG3 505 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 CROTQ9UKG9 612 aa12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 TDRKHQ9Y2W6 561 aaKnown RBP12.91□□□□□ -0.34
SIRPB3P-201ENST00000340424 IQCF5A8MTL0 148 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 CTIFO43310 598 aaKnown RBP12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 AVILO75366 819 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 C1QL1O75973 258 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 USP1O94782 785 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 FKBP9O95302 570 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 CHRM5P08912 532 aaPredicted RBP12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 HBQ1P09105 142 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 ITGB6P18564 788 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 TCN2P20062 427 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 CCNFP41002 786 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 EIF3BP55884 814 aaKnown RBP12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 CDC20Q12834 499 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 GPR19Q15760 415 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 KYNUQ16719 465 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 SLC5A12Q1EHB4 618 aa12.9□□□□□ -0.34
SIRPB3P-201ENST00000340424 LINC00303Q3SY05 128 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms