RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CDKL4Q5MAI5 379 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 SPATA19Q7Z5L4 167 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 HEATR4Q86WZ0 1026 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 ENDOVQ8N8Q3 282 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 ZCCHC2Q9C0B9 1178 aaKnown RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 TTYH1Q9H313 450 aaPredicted RBP21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 AIG1Q9NVV5 245 aa21.88■■□□□ 1.09
PDLIM2-203ENST00000339162 MRASO14807 208 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 CAPN3P20807 821 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 HNMTP50135 292 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 UFM1P61960 85 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 ERVK-8P63133 956 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 HMGCS1Q01581 520 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 WSCD2Q2TBF2 565 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 IER5LQ5T953 404 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 RETREG3Q86VR2 466 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 HIC2Q96JB3 615 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC39A3Q9BRY0 314 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 H3BM21 787 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 LSM1O15116 133 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 POP7O75817 140 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 CLDN9O95484 217 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 C5AR1P21730 350 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 AP1S2P56377 157 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 RPS14P62263 151 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 GTF2H3Q13889 308 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 CEACAM7Q14002 265 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 GSTA3Q16772 222 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 ZNF658BQ4V348 819 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 RFTN2Q52LD8 501 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 PNCKQ6P2M8 343 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 LRRC70Q7Z2Q7 622 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 RASGRP3Q8IV61 690 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC22A15Q8IZD6 547 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 TCAIMQ8N3R3 496 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 PPFIBP2Q8ND30 876 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 CCT7Q99832 543 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 EPHX3Q9H6B9 360 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 IL1RL2Q9HB29 575 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 MBNL1Q9NR56 388 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 ZNF490Q9ULM2 529 aaPredicted RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 PCDHGA7Q9Y5G6 932 aa21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 ZFC3H1O60293 1989 aaKnown RBP21.87■■□□□ 1.09
PDLIM2-203ENST00000339162 ULK1O75385 1050 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PAK4O96013 591 aaPredicted RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 ADH1BP00325 375 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 TCN1P20061 433 aaPredicted RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PFN3P60673 137 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 NFE2L1Q14494 772 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 AP5B1Q2VPB7 878 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 BCL7AQ4VC05 210 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 METTL2BQ6P1Q9 378 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 XKR5Q6UX68 686 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 IL17RCQ8NAC3 791 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 FAM156AQ8NDB6 213 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 NUDT8Q8WV74 236 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 LRCH3Q96II8 777 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 INTS7Q9NVH2 962 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PRPF19Q9UMS4 504 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 CKAP5Q14008 2032 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 NUMA1Q14980 2115 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PRAMEF4O60810 478 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 ADAM23O75077 832 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 ANP32DO95626 131 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 LMNAP02545 664 aaKnown RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 NTSR1P30989 418 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 ATXN3P54252 364 aaPredicted RBP21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PSME3P61289 254 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PIGGQ5H8A4 983 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 PRAMEF9Q5VWM5 478 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 LMNTD1Q8N9Z9 388 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 OSBPL6Q9BZF3 934 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 FBXL12Q9NXK8 326 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 ADA2Q9NZK5 511 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 LMCD1Q9NZU5 365 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 TRPS1Q9UHF7 1281 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 CCL27Q9Y4X3 112 aa21.86■■□□□ 1.09
PDLIM2-203ENST00000339162 E7ENX8 843 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 MANBAO00462 879 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 COL9A1P20849 921 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 NEK2P51955 445 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 CCNIQ14094 377 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 ZNF776Q68DI1 518 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 TRMT11Q7Z4G4 463 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 SPDYE1Q8NFV5 336 aaPredicted RBP21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 VPS33AQ96AX1 596 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 MED8Q96G25 268 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 ZFR2Q9UPR6 939 aaKnown RBP21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 OR1A2Q9Y585 309 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 PIAS3Q9Y6X2 628 aa21.85■■□□□ 1.09
PDLIM2-203ENST00000339162 KLF8O95600 359 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 SLC16A8O95907 504 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 XRCC1P18887 633 aaPredicted RBP21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 FGL2Q14314 439 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 ZNF423Q2M1K9 1284 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 OR2T3Q8NH03 318 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 PYDC1Q8WXC3 89 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 NECTIN4Q96NY8 510 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 PKP4Q99569 1192 aa21.84■■□□□ 1.09
PDLIM2-203ENST00000339162 TM7SF3Q9NS93 570 aa21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms