RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 CCNG1P51959 295 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 PGGT1BP53609 377 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 HPCAP84074 193 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CACNG1Q06432 222 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CAMK1Q14012 370 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 KCNJ11Q14654 390 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 HNRNPA1L2Q32P51 320 aaKnown RBP11.58□□□□□ -0.56
HDAC6-201ENST00000334136 SLCO6A1Q86UG4 719 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CLYBLQ8N0X4 340 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 GPATCH1Q9BRR8 931 aaKnown RBP11.58□□□□□ -0.56
HDAC6-201ENST00000334136 USE1Q9NZ43 259 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 SIRPGQ9P1W8 387 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 DYTNA2CJ06 578 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 PRIM2P49643 509 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 TAS2R39P59534 338 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 IL2P60568 153 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 NIPAL4Q0D2K0 466 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 TLR1Q15399 786 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 PHYKPLQ8IUZ5 450 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 MTFMTQ96DP5 389 aaKnown RBP11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CHFRQ96EP1 664 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 FANCEQ9HB96 536 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 RAD51BO15315 384 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CNOT3O75175 753 aaKnown RBP11.58□□□□□ -0.56
HDAC6-201ENST00000334136 IPO13O94829 963 aaKnown RBP11.58□□□□□ -0.56
HDAC6-201ENST00000334136 SOX6P35712 828 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 DHPSP49366 369 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CYP4F2P78329 520 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CYP4F3Q08477 520 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 SEMA3BQ13214 749 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 CST6Q15828 149 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 KCTD8Q6ZWB6 473 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 RDH11Q8TC12 318 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 VWA7Q9Y334 891 aa11.58□□□□□ -0.56
HDAC6-201ENST00000334136 IGLV3-10A0A075B6K4 115 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 E7ENX8 843 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 KPNA5O15131 536 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SLC7A4O43246 635 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 DGKAP23743 735 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SOAT1P35610 550 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PRKG2Q13237 762 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 MLF2Q15773 248 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 FAM45BPQ6NSW5 357 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 OOSP2Q86WS3 158 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ZNF540Q8NDQ6 660 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 OR9I1Q8NGQ6 314 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 FAM45AQ8TCE6 357 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 MCOLN3Q8TDD5 553 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 CDKN2AIPNLQ96HQ2 116 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 CYP8B1Q9UNU6 501 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SATB2Q9UPW6 733 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 EI24O14681 340 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 HOXC11O43248 304 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 GOT2P00505 430 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PABPC4LP0CB38 370 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ZNF30P17039 623 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PPP1R8Q12972 351 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 LRRC66Q68CR7 880 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 REP15Q6BDI9 236 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PRR23BQ6ZRT6 265 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 CHST15Q7LFX5 561 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 TBC1D19Q8N5T2 526 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 OR56A4Q8NGH8 313 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 UBASH3BQ8TF42 649 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 RAB7BQ96AH8 199 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 NUS1Q96E22 293 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ZHX1-C8orf76Q96EF9 292 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 C1orf21Q9H246 121 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 C3orf18Q9UK00 162 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 A0A1W2PPW3 197 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 C5orf58C9J3I9 102 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 LSM1O15116 133 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 UGT1A6P19224 532 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 UGT1A1P22309 533 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 UGT1A4P22310 534 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 UGT1A3P35503 534 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 UGT1A5P35504 534 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 RPS9P46781 194 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 TFF2Q03403 129 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SIM2Q14190 667 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 MFSD4BQ5TF39 518 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 Q6ZVL8 140 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 RPS27LQ71UM5 84 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 BHLHA9Q7RTU4 235 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 PAGE2Q7Z2X7 111 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SERPINA9Q86WD7 417 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 RAVER1Q8IY67 606 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 GJD3Q8N144 294 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SLC44A3Q8N4M1 653 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 VPS37AQ8NEZ2 397 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 RIOK2Q9BVS4 552 aaKnown RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ELOVL6Q9H5J4 265 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 TRIM39Q9HCM9 518 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 SMPD3Q9NY59 655 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 LEF1Q9UJU2 399 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-201ENST00000334136 FAM159BA6NKW6 160 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 MID1O15344 667 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 ZBTB14O43829 449 aa11.57□□□□□ -0.56
HDAC6-201ENST00000334136 CATP04040 527 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms