RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 PLOD1Q02809 727 aaPredicted RBP22.68■■□□□ 1.22
TSEN54-201ENST00000333213 SNX19Q92543 992 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 ERP27Q96DN0 273 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 EBF4Q9BQW3 602 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 TRMOQ9BU70 441 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 CARS2Q9HA77 564 aaKnown RBP22.68■■□□□ 1.22
TSEN54-201ENST00000333213 ZNF225Q9UK10 706 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 WDR37Q9Y2I8 494 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 GPSM3Q9Y4H4 160 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 WDFY4Q6ZS81 3184 aa22.68■■□□□ 1.22
TSEN54-201ENST00000333213 C1orf105O95561 183 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 ANXA5P08758 320 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 CYP2A7P20853 494 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 BCKDHBP21953 392 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 PRDX3P30048 256 aaKnown RBP22.67■■□□□ 1.22
TSEN54-201ENST00000333213 AQP5P55064 265 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 RPA4Q13156 261 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 SH2D4BQ5SQS7 431 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 VWA5B1Q5TIE3 1220 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 WDR75Q8IWA0 830 aaKnown RBP22.67■■□□□ 1.22
TSEN54-201ENST00000333213 MAPK15Q8TD08 544 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 MCOLN3Q8TDD5 553 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 SLC6A18Q96N87 628 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 TIMM29Q9BSF4 260 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 IER2Q9BTL4 223 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 TMEM120AQ9BXJ8 343 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 GPR27Q9NS67 375 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 L3MBTL1Q9Y468 752 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 DMDP11532 3685 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 NDUFS2O75306 463 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 S100BP04271 92 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-201ENST00000333213 JUNP05412 331 aaKnown RBP22.67■■□□□ 1.22
TSEN54-201ENST00000333213 HIST1H2AGP0C0S8 130 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-201ENST00000333213 ALOX15P16050 662 aaPredicted RBP22.67■■□□□ 1.22
TSEN54-201ENST00000333213 AOC1P19801 751 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 HIST1H2ADP20671 130 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 HIST1H2AHQ96KK5 128 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 HIST1H2AJQ99878 128 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 H2AFJQ9BTM1 129 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 CD244Q9BZW8 370 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 WWOXQ9NZC7 414 aa22.67■■□□□ 1.22
TSEN54-201ENST00000333213 VPS13AQ96RL7 3174 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 GON4LQ3T8J9 2241 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 MATN2O00339 956 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 MAOBP27338 520 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 HTR1BP28222 390 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 GGT5P36269 586 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 RABIFP47224 123 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 CLNS1AP54105 237 aaKnown RBP22.66■■□□□ 1.22
TSEN54-201ENST00000333213 RPL6Q02878 288 aaKnown RBP22.66■■□□□ 1.22
TSEN54-201ENST00000333213 CDKL4Q5MAI5 379 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 PDZD3Q86UT5 571 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 CADM4Q8NFZ8 388 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 UBTD2Q8WUN7 234 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 MIEF2Q96C03 454 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 TUBB6Q9BUF5 446 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 TRIM54Q9BYV2 358 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 LNPEPQ9UIQ6 1025 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 STK38LQ9Y2H1 464 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 ABCA7Q8IZY2 2146 aa22.66■■□□□ 1.22
TSEN54-201ENST00000333213 PLXND1Q9Y4D7 1925 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 CATP04040 527 aaKnown RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 KELP23276 732 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 THOP1P52888 689 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 ARFIP2P53365 341 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 FOXA1P55317 472 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 AP1S2P56377 157 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 LCP2Q13094 533 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 ALG11Q2TAA5 492 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 RD3Q7Z3Z2 195 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 OR52B6Q8NGF0 335 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 UTP4Q969X6 686 aaKnown RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 FOPNLQ96NB1 174 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 PKP4Q99569 1192 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 HGH1Q9BTY7 390 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 EML4Q9HC35 981 aaKnown RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 SPATA6Q9NWH7 488 aaPredicted RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 KCNK4Q9NYG8 393 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 TNPO3Q9Y5L0 923 aaKnown RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 CFAP20Q9Y6A4 193 aaKnown RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 MYO15AQ9UKN7 3530 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 TNFRSF10CO14798 259 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 TCEA2Q15560 299 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 WASHC2DQ5SRD0 308 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 CAPRIN2Q6IMN6 1127 aaKnown RBP22.65■■□□□ 1.22
TSEN54-201ENST00000333213 GOLGA7Q7Z5G4 137 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 PHC3Q8NDX5 983 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 CCL4L1Q8NHW4 92 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 PYCR2Q96C36 320 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 OR2M4Q96R27 311 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 WWP1Q9H0M0 922 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 OSGEPL1Q9H4B0 414 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 MID1IP1Q9NPA3 183 aa22.65■■□□□ 1.22
TSEN54-201ENST00000333213 KLHL33A6NCF5 533 aa22.64■■□□□ 1.21
TSEN54-201ENST00000333213 OR7A17O14581 309 aa22.64■■□□□ 1.21
TSEN54-201ENST00000333213 DCXO43602 365 aa22.64■■□□□ 1.21
TSEN54-201ENST00000333213 SNUPNO95149 360 aaKnown RBP22.64■■□□□ 1.21
TSEN54-201ENST00000333213 CD27P26842 260 aa22.64■■□□□ 1.21
TSEN54-201ENST00000333213 MAP4P27816 1152 aaKnown RBP22.64■■□□□ 1.21
TSEN54-201ENST00000333213 NUDT1P36639 197 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms