RNA–Protein interactions for RNA: ENST00000331728.8

LIMK2-201, Transcript of LIM domain kinase 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIMK2, Length 3,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-201ENST00000331728 SMPD4Q9NXE4 827 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 RIMKLBQ9ULI2 386 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 PNMA8BQ9ULN7 279 aaPredicted RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 SLC45A1Q9Y2W3 748 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 SAMHD1Q9Y3Z3 626 aaKnown RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 PCDHB1Q9Y5F3 818 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ZNF236Q9UL36 1845 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 UPK1AO00322 258 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 TNFRSF10BO14763 440 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ACSL4O60488 711 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 CPSF4O95639 269 aaKnown RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 HTR1AP08908 422 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ZNF865P0CJ78 1059 aaPredicted RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 MYCLP1P12525 358 aaPredicted RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 TGM1P22735 817 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ATP5C1P36542 298 aaKnown RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ZNF140P52738 457 aaPredicted RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ACVR1Q04771 509 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 LAPTM4AQ15012 233 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 NPTX1Q15818 432 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 CTF1Q16619 201 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 RFTN2Q52LD8 501 aaPredicted RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 VARS2Q5ST30 1063 aaKnown RBP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 LDLRAD1Q5T700 205 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 LINGO4Q6UY18 593 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 Q6ZSR9 355 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 SLC22A16Q86VW1 577 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 MCFD2Q8NI22 146 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 CD200R1Q8TD46 325 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ASIC4Q96FT7 647 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ITCHQ96J02 903 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 SMIM14Q96QK8 99 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 BCL7BQ9BQE9 202 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 ABCG8Q9H221 673 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 CCSER2Q9H7U1 834 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 REEP1Q9H902 201 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 CCNB1IP1Q9NPC3 277 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.56□□□□□ -1.04
LIMK2-201ENST00000331728 IKZF3Q9UKT9 509 aa8.56□□□□□ -1.04
LIMK2-201ENST00000331728 MIA3Q5JRA6 1907 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 ARVCFO00192 962 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 ARNTLO00327 626 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 CHRNA1P02708 482 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 GDF5P43026 501 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 GP2P55259 537 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 CACNG1Q06432 222 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 TRAF3Q13114 568 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 DDX39BQ13838 428 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 NDUFA5Q16718 116 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 MFSD14CQ5VZR4 134 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 RNF219Q5W0B1 726 aaPredicted RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 THOC7Q6I9Y2 204 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 ZCCHC8Q6NZY4 707 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 NEK10Q6ZWH5 1172 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 NANOGNBQ7Z5D8 188 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 CARNMT1Q8N4J0 409 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 PSKH2Q96QS6 385 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 KRT84Q9NSB2 600 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 VPS51Q9UID3 782 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 SAMD4AQ9UPU9 718 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 RFXANKO14593 260 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 PRSS23O95084 383 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 GABARAPO95166 117 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 SLC25A14O95258 325 aaPredicted RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 WISP3O95389 354 aaPredicted RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 BMP4P12644 408 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 HNRNPFP52597 415 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 CTU2Q2VPK5 515 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 INAVAQ3KP66 663 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 PLA2G4EQ3MJ16 856 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 GTDC1Q4AE62 458 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 ARMC12Q5T9G4 340 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 DSG4Q86SJ6 1040 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 RBFAQ8N0V3 343 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 FAM86B1Q8N7N1 296 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 FRS2Q8WU20 508 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 NUDT8Q8WV74 236 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 FATE1Q969F0 183 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 TPD52L3Q96J77 140 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 MBOAT4Q96T53 435 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 OSBPL10Q9BXB5 764 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 TM6SF2Q9BZW4 377 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 ARL15Q9NXU5 204 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 PDP1Q9P0J1 537 aaPredicted RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 FAM8A1Q9UBU6 413 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 DNMT3LQ9UJW3 386 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 hCG_2039718K7EN88 272 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 E2F3O00716 465 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 SCAMP3O14828 347 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 MGEA5O60502 916 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 ZNF623O75123 536 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 CLDN11O75508 207 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 APOA1P02647 267 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 HOXB6P17509 224 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 DCTP40126 519 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 MAP2K4P45985 399 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 CDH4P55283 916 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 VBP1P61758 197 aa8.55□□□□□ -1.04
LIMK2-201ENST00000331728 RPS14P62263 151 aaKnown RBP8.55□□□□□ -1.04
LIMK2-201ENST00000331728 IFITM3Q01628 133 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms