RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 L7N2F9 121 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 SERPINA6P08185 405 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 VAMP2P63027 116 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 BNIP2Q12982 314 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 E2F2Q14209 437 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 CLNKQ7Z7G1 428 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 AKAP14Q86UN6 197 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 CPSF7Q8N684 471 aaKnown RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 KREMEN2Q8NCW0 462 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 BSNDQ8WZ55 320 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 SH3YL1Q96HL8 342 aaPredicted RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 METTL7AQ9H8H3 244 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ZNF639Q9UID6 485 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 AP4B1Q9Y6B7 739 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 MYBPHLA2RUH7 354 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 RCCD1A6NED2 376 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GTF2BQ00403 316 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 NWD1Q149M9 1564 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 PAOXQ6QHF9 649 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 PTF1AQ7RTS3 328 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 SPATA19Q7Z5L4 167 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 AMZ2Q86W34 360 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 TBC1D21Q8IYX1 336 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 AADATQ8N5Z0 425 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GBA3Q9H227 469 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 CLK4Q9HAZ1 481 aaKnown RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 ERVK-5Q9HDB9 667 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 MRPS17Q9Y2R5 130 aaKnown RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 MFHAS1Q9Y4C4 1052 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 TEX46H3BTG2 121 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 HDAC3O15379 428 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 IPO13O94829 963 aaKnown RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 JMJD7P0C870 316 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 OR3A3P47888 321 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 OR3A2P47893 321 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 S100A10P60903 97 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 RAB11FIP2Q7L804 512 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 CERS5Q8N5B7 392 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GATSQ8NAP1 163 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 OR8H1Q8NGG4 311 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 MED28Q9H204 178 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ZDHHC4Q9NPG8 344 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 HPF1Q9NWY4 346 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 CA14Q9ULX7 337 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ERVW-1Q9UQF0 538 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 PCDHA2Q9Y5H9 948 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 TSPAN4O14817 238 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 VNN2O95498 520 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GABRB2P47870 512 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 NRIP1P48552 1158 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GNA12Q03113 381 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ITGB3BPQ13352 177 aaPredicted RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 DSG2Q14126 1118 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 LPAL2Q16609 132 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 BMT2Q1RMZ1 405 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 FIGNQ5HY92 759 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 SH3PXD2AQ5TCZ1 1133 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 OLFML1Q6UWY5 402 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 USP30Q70CQ3 517 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 HMGN2P46Q86SG4 172 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 TOP6BLQ8N6T0 577 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ADAD1Q96M93 576 aaKnown RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 ZSWIM3Q96MP5 696 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 A0A1W2PPL8 197 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 BLOC1S5-TXNDC5H3BN57 136 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 SCDO00767 359 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 REM1O75628 298 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 STK16O75716 305 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 MSL3P1P0C860 447 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GRM5P41594 1212 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GPD2P43304 727 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 IRF9Q00978 393 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ADGRE1Q14246 886 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 PRAMEF17Q5VTA0 474 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ANO7Q6IWH7 933 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 ANKRD26P1Q6NSI1 321 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 GRASPQ7Z6J2 395 aaPredicted RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 SLAIN1Q8ND83 568 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 TRPV1Q8NER1 839 aa10.39□□□□□ -0.75
CLN8-201ENST00000331222 EIF3KQ9UBQ5 218 aaKnown RBP10.39□□□□□ -0.75
CLN8-201ENST00000331222 GLOD5A6NK44 160 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 CHST10O43529 356 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SSX5O60225 188 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 KDM4BO94953 1096 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 CCND3P30281 292 aaPredicted RBP10.38□□□□□ -0.75
CLN8-201ENST00000331222 SDC2P34741 201 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 RASGEF1BQ0VAM2 473 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 ENPP2Q13822 863 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 ABHD13Q7L211 337 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 SH3RF2Q8TEC5 729 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 TCF12Q99081 682 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 GKN1Q9NS71 199 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 FBXL12Q9NXK8 326 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 DKKL1Q9UK85 242 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 TMEM150CB9EJG8 249 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 UGT2B11O75310 529 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 PEX14O75381 377 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 APOC1P02654 83 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 ALPPP05187 535 aa10.38□□□□□ -0.75
CLN8-201ENST00000331222 LHCGRP22888 699 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms