RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 J3QRK9 145 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 MANBAO00462 879 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 SERPINA1P01009 418 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 AGXTP21549 392 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 KCNAB2Q13303 367 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 GPNMBQ14956 572 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 TBC1D25Q3MII6 688 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 C16orf87Q6PH81 154 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 DNAJB7Q7Z6W7 309 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 PARP8Q8N3A8 854 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF513Q8N8E2 541 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 PDPRQ8NCN5 879 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF461Q8TAF7 563 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 FBXL8Q96CD0 374 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 CPQQ9Y646 472 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 SLC28A1O00337 649 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 BCKDHAP12694 445 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 CYP4B1P13584 511 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 EFNA1P20827 205 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 RPIAP49247 311 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 SLC8B1Q6J4K2 584 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 RETSATQ6NUM9 610 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF773Q6PK81 442 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 USP51Q70EK9 711 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 NECAB2Q7Z6G3 386 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 TMCO2Q7Z6W1 182 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 GALNT10Q86SR1 603 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF548Q8NEK5 533 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 OR8J3Q8NGG0 315 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 GIPC3Q8TF64 312 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 NRBF2Q96F24 287 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 PDLIM5Q96HC4 596 aaKnown RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 INPP5KQ9BT40 448 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 ELOVL6Q9H5J4 265 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 MTRRQ9UBK8 725 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 DNAJB9Q9UBS3 223 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 AASSQ9UDR5 926 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 CIDEBQ9UHD4 219 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 CLEC4EQ9ULY5 219 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 DLGAP4Q9Y2H0 992 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 TRIM64CA6NLI5 447 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 MYO1GB0I1T2 1018 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 H0YAE9 185 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 GAPDHSO14556 408 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 FZD6O60353 706 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 GLUD1P00367 558 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 CCNA2P20248 432 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 S100A3P33764 101 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 TTKP33981 857 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 BOP1Q14137 746 aaKnown RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 INO80DQ53TQ3 878 aaPredicted RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 MSRB3Q8IXL7 192 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 C10orf111Q8N326 155 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 RNF175Q8N4F7 328 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 LEMD2Q8NC56 503 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 LHPPQ9H008 270 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 FAM118AQ9NWS6 357 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 LSM7Q9UK45 103 aaKnown RBP13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 PCDHB14Q9Y5E9 798 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 DGKBQ9Y6T7 804 aa13.74□□□□□ -0.21
ATP2C1-201ENST00000328560 A0A1W2PQ67 120 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 PABPN1LA6NDY0 278 aaKnown RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 MTX2O75431 263 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ZBTB11O95625 1053 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 TRBC1P01850 177 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CKMP06732 381 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 MSH3P20585 1137 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ACRV1P26436 265 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 PSMD7P51665 324 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 EPHB3P54753 998 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 DDX39BQ13838 428 aaKnown RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 LHX8Q68G74 356 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 HJURPQ8NCD3 748 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 NETO1Q8TDF5 533 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ADAMTS16Q8TE57 1224 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 SNX19Q92543 992 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CWH43Q9H720 699 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CREBZFQ9NS37 354 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 C1orf109Q9NX04 203 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CD84Q9UIB8 345 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ZNF639Q9UID6 485 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CCL27Q9Y4X3 112 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CREG1O75629 220 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 DIRAS1O95057 198 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 KRT6AP02538 564 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 KRT6BP04259 564 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 URODP06132 367 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 CD9P21926 228 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ITPKAP23677 461 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 TACR1P25103 407 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 KRT6CP48668 564 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 MRPL19P49406 292 aaKnown RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 STK19P49842 368 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ZXDBP98169 803 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 MAD2L1Q13257 205 aaPredicted RBP13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 PON2Q15165 354 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 TTC23Q5W5X9 447 aa13.73□□□□□ -0.21
ATP2C1-201ENST00000328560 ELMSAN1Q6PJG2 1045 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms