RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 SOX30O94993 753 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CPN2P22792 545 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 SP100P23497 879 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 PDK3Q15120 406 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TRIQKQ629K1 86 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 ERN2Q76MJ5 926 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CROCCP3Q8IVE0 287 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TSPAN14Q8NG11 270 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TRIM63Q969Q1 353 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 SIGLEC10Q96LC7 697 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 DUSP26Q9BV47 211 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 MCM8Q9UJA3 840 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 A8MT66 165 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TMEM150CB9EJG8 249 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TSC22D2O75157 780 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 LAMP2P13473 410 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 ACTR1BP42025 376 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 ACTR1AP61163 376 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 DEF8Q6ZN54 512 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CENPNQ96H22 339 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 GPR62Q9BZJ7 368 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CARS2Q9HA77 564 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CLK4Q9HAZ1 481 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 AGPSO00116 658 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 PTGESO14684 152 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 NR2F6P10588 404 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 NUDT1P36639 197 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 NUP62P37198 522 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CHRNA4P43681 627 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 LEPRP48357 1165 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 IDH2P48735 452 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 FBXO43Q4G163 708 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 SPANXN2Q5MJ10 180 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 LY6G5CQ5SRR4 150 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 RSBN1Q5VWQ0 802 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 PAQR3Q6TCH7 311 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 Q6ZVU0 165 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 BNIPLQ7Z465 357 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 MMAAQ8IVH4 418 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 SEC14L1Q92503 715 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 LMLNQ96KR4 655 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 HMG20AQ9NP66 347 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 UBAP1Q9NZ09 502 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 VPS29Q9UBQ0 182 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 PCDHB11Q9Y5F2 797 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 NT5EP21589 574 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TXNL4AP83876 142 aaKnown RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TAB1Q15750 504 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TXNRD3NBQ6F5E7 133 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 CLVS1Q8IUQ0 354 aaPredicted RBP11.2□□□□□ -0.62
COL4A5-201ENST00000328300 OR10T2Q8NGX3 314 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 AGAP11Q8TF27 550 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 VMP1Q96GC9 406 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 BTBD9Q96Q07 612 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 DCUN1D5Q9BTE7 237 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 BRINP2Q9C0B6 783 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 TIMM22Q9Y584 194 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 WNT6Q9Y6F9 365 aa11.2□□□□□ -0.62
COL4A5-201ENST00000328300 FADS2P1A8MWK0 482 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 SLC31A1O15431 190 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 GJA5P36382 358 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 FEN1P39748 380 aaKnown RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 KCNJ2P63252 427 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 NFKB2Q00653 900 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 DMPKQ09013 629 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ITGADQ13349 1161 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 LRRC66Q68CR7 880 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 MOAP1Q96BY2 351 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 LYARQ9NX58 379 aaKnown RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 FBXL12Q9NXK8 326 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 H0YC42 278 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 COQ9O75208 318 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ALPIP09923 528 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 CSF2RAP15509 400 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 MPIP34949 423 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 CRISP3P54108 245 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 TAS2R50P59544 299 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 RPS21P63220 83 aaKnown RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ARMC4Q5T2S8 1044 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 RHEBL1Q8TAI7 183 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 FEM1AQ9BSK4 669 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 SUSD2Q9UGT4 822 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 OR6B1O95007 311 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 HSD3B1P14060 373 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 CSNK2A2P19784 350 aaPredicted RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 HSD3B2P26439 372 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 SHMT2P34897 504 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 TIE1P35590 1138 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 RABGGTBP53611 331 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 CYP4F2P78329 520 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 IFI44LQ53G44 452 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 FRG2Q64ET8 278 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 PNPT1Q8TCS8 783 aaKnown RBP11.19□□□□□ -0.62
COL4A5-201ENST00000328300 FRG2BQ96QU4 278 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ZMPSTE24O75844 475 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 KRT36O76013 467 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 CD247P20963 164 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 USP46P62068 366 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 PLEKHG4Q58EX7 1191 aa11.19□□□□□ -0.62
COL4A5-201ENST00000328300 ENPP7Q6UWV6 458 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms