RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 PFN3P60673 137 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 PLOD1Q02809 727 aaPredicted RBP12.47□□□□□ -0.41
DDX39A-202ENST00000324340 HSPA14Q0VDF9 509 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 CDC16Q13042 620 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 BOP1Q14137 746 aaKnown RBP12.47□□□□□ -0.41
DDX39A-202ENST00000324340 CFAP157Q5JU67 520 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 NAPRTQ6XQN6 538 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 TRAPPC5Q8IUR0 188 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 VRK3Q8IV63 474 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.47□□□□□ -0.41
DDX39A-202ENST00000324340 SLC22A15Q8IZD6 547 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 OR2L2Q8NH16 312 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 EDAQ92838 391 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 ITPKCQ96DU7 683 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 L3HYPDHQ96EM0 354 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 SCARF2Q96GP6 870 aaPredicted RBP12.47□□□□□ -0.41
DDX39A-202ENST00000324340 BMFQ96LC9 184 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 GATA5Q9BWX5 397 aaPredicted RBP12.47□□□□□ -0.41
DDX39A-202ENST00000324340 C20orf27Q9GZN8 174 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 RDH14Q9HBH5 336 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 SLCO1B3Q9NPD5 702 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 FZD3Q9NPG1 666 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 ARL8BQ9NVJ2 186 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 THAP1Q9NVV9 213 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 ZNHIT2Q9UHR6 403 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 RNF112Q9ULX5 631 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 ZNF232Q9UNY5 417 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM98Q9Y2Y6 226 aa12.47□□□□□ -0.41
DDX39A-202ENST00000324340 A0A0J9YVX5 310 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 POM121BA6NF01 834 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 NEMP2A6NFY4 417 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 MGAT4DA6NG13 374 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 STX16-NPEPL1H3BU86 382 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 GFYI3L273 518 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 UBXN8O00124 270 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CACNB4O00305 520 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 STX16O14662 325 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CASQ2O14958 399 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 SLC16A5O15375 505 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 NPHS1O60500 1241 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CBFA2T3O75081 653 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 POP7O75817 140 aaKnown RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 MATN4O95460 622 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CEACAM5P06731 702 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 C8GP07360 202 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 DCNP07585 359 aaKnown RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 ENO2P09104 434 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 IMPDH1P20839 514 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 HOXA6P31267 233 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 AKT2P31751 481 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 SERPINB5P36952 375 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 MAPK9P45984 424 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CCR3P51677 355 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 HK3P52790 923 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 YPEL5P62699 121 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 ARHGAP8P85298 464 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CBX3Q13185 183 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 SP140Q13342 867 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 TGFBIQ15582 683 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CCDC92Q53HC0 331 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 CDKL4Q5MAI5 379 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 GCNT7Q6ZNI0 430 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 ZCCHC23Q6ZST2 131 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 LRRTM4Q86VH4 590 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 GPSM1Q86YR5 675 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 SCUBE1Q8IWY4 988 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 MARVELD2Q8N4S9 558 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 HM13Q8TCT9 377 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 TMEM159Q96B96 161 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 BIRC7Q96CA5 298 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 NECAB3Q96P71 396 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 ORAI3Q9BRQ5 295 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 SIKE1Q9BRV8 207 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 GPR174Q9BXC1 333 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 C1QTNF3Q9BXJ4 246 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 COL25A1Q9BXS0 654 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 TPSD1Q9BZJ3 242 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 DRC3Q9H069 523 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 OCEL1Q9H607 264 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 COG4Q9H9E3 785 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 KCNK4Q9NYG8 393 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 NUDT4Q9NZJ9 180 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 HEY2Q9UBP5 337 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 ADAMTS6Q9UKP5 1117 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 TMED5Q9Y3A6 229 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 OARD1Q9Y530 152 aa12.46□□□□□ -0.41
DDX39A-202ENST00000324340 PCYT1BQ9Y5K3 369 aaPredicted RBP12.46□□□□□ -0.41
DDX39A-202ENST00000324340 PRAMEF26H0Y7S4 382 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 KMOO15229 486 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 GRID2O43424 1007 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 DENRO43583 198 aaKnown RBP12.45□□□□□ -0.42
DDX39A-202ENST00000324340 FUCA1P04066 466 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 SERPINB3P29508 390 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ARRB2P32121 409 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 SLC1A6P48664 564 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 NAGLUP54802 743 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ALDH18A1P54886 795 aaKnown RBP12.45□□□□□ -0.42
DDX39A-202ENST00000324340 CLDN2P57739 230 aa12.45□□□□□ -0.42
DDX39A-202ENST00000324340 ABCE1P61221 599 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms